RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 RIN1Q13671 783 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 EPHA7Q15375 998 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 CCDC93Q567U6 631 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 ESRP1Q6NXG1 681 aaKnown RBP6.23□□□□□ -1.41
BRCA1-217ENST00000487825 CNNM4Q6P4Q7 775 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 MAMDC4Q6UXC1 1216 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 RNF207Q6ZRF8 634 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 SGMS1Q86VZ5 419 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 NXPE1Q8N323 547 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 SYNPOQ8N3V7 929 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 GCDHQ92947 438 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-217ENST00000487825 RPL10LQ96L21 214 aaKnown RBP6.23□□□□□ -1.41
BRCA1-217ENST00000487825 KRTAP17-1Q9BYP8 105 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 SLC12A5Q9H2X9 1139 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 ZNF277Q9NRM2 450 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-217ENST00000487825 IFT57Q9NWB7 429 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 TERF2IPQ9NYB0 399 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 KCMF1Q9P0J7 381 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 SRRDQ9UH36 339 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 LAMB1P07942 1786 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 A0A1W2PRX2 142 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 C2orf78A6NCI8 922 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 GOLGA8BA8MQT2 603 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 SRGNP10124 158 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 HIBADHP31937 336 aaKnown RBP6.22□□□□□ -1.41
BRCA1-217ENST00000487825 IARSP41252 1262 aaKnown RBP6.22□□□□□ -1.41
BRCA1-217ENST00000487825 EPS15P42566 896 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 ADCY7P51828 1080 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 FOXE3Q13461 319 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 MYBPC3Q14896 1274 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 CREB3L3Q68CJ9 461 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 FBXO46Q6PJ61 603 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-217ENST00000487825 ZFPM1Q8IX07 1006 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 D2HGDHQ8N465 521 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 RTF1Q92541 710 aaKnown RBP6.22□□□□□ -1.41
BRCA1-217ENST00000487825 APPBP2Q92624 585 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 GFM2Q969S9 779 aaKnown RBP6.22□□□□□ -1.41
BRCA1-217ENST00000487825 DYDC2Q96IM9 177 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 TLR9Q9NR96 1032 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 INTS7Q9NVH2 962 aaKnown RBP6.22□□□□□ -1.41
BRCA1-217ENST00000487825 DNAI1Q9UI46 699 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 SPO11Q9Y5K1 396 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 HS3ST3A1Q9Y663 406 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 MUC3AQ02505 3323 aa6.22□□□□□ -1.41
BRCA1-217ENST00000487825 RAB3GAP2Q9H2M9 1393 aa6.21□□□□□ -1.41
BRCA1-217ENST00000487825 ZNF891A8MT65 544 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-217ENST00000487825 GAS7O60861 476 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 FZD7O75084 574 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 SESN2P58004 480 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-217ENST00000487825 BPIFB4P59827 614 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 HHEXQ03014 270 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 TCIRG1Q13488 830 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 PRR5LQ6MZQ0 368 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 C16orf86Q6ZW13 317 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 NPM2Q86SE8 214 aaKnown RBP6.21□□□□□ -1.42
BRCA1-217ENST00000487825 LRRTM3Q86VH5 581 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 C1orf210Q8IVY1 113 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 DHX37Q8IY37 1157 aaKnown RBP6.21□□□□□ -1.42
BRCA1-217ENST00000487825 C7orf31Q8N865 590 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 ANKRD53Q8N9V6 530 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 RPGRQ92834 1020 aaKnown RBP6.21□□□□□ -1.42
BRCA1-217ENST00000487825 NKD2Q969F2 451 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-217ENST00000487825 SLC7A6OSQ96CW6 309 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-217ENST00000487825 MASTLQ96GX5 879 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 WDR92Q96MX6 357 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 MYL10Q9BUA6 226 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 GLIS2Q9BZE0 524 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-217ENST00000487825 CSRNP2Q9H175 543 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 SLC6A15Q9H2J7 730 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 POFUT1Q9H488 388 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 MSL2Q9HCI7 577 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 THG1LQ9NWX6 298 aaKnown RBP6.21□□□□□ -1.42
BRCA1-217ENST00000487825 MRPL42Q9Y6G3 142 aaKnown RBP6.21□□□□□ -1.42
BRCA1-217ENST00000487825 EYSQ5T1H1 3165 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 KDM3BQ7LBC6 1761 aa6.21□□□□□ -1.42
BRCA1-217ENST00000487825 NPIPB8E9PQR5 432 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 PRPF6O94906 941 aaKnown RBP6.2□□□□□ -1.42
BRCA1-217ENST00000487825 F2P00734 622 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 HUNKP57058 714 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 DGCR2P98153 550 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 KIF23Q02241 960 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-217ENST00000487825 ADCY2Q08462 1091 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 ADCY1Q08828 1119 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 TIGD7Q6NT04 549 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-217ENST00000487825 RGMBQ6NW40 437 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 UNQ6494/PRO21346Q6UXR6 183 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 SYNE4Q8N205 404 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 CHTF18Q8WVB6 975 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 RABGGTAQ92696 567 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 LPPQ93052 612 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 POLR3BQ9NW08 1133 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-217ENST00000487825 PGAP2Q9UHJ9 254 aa6.2□□□□□ -1.42
BRCA1-217ENST00000487825 PMS2P1A4D2B8 440 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 CAPN14A8MX76 684 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 HSP90AB1P08238 724 aaKnown RBP6.19□□□□□ -1.42
BRCA1-217ENST00000487825 HNRNPLP14866 589 aaKnown RBP eCLIP6.19□□□□□ -1.42
BRCA1-217ENST00000487825 ACVRL1P37023 503 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 BCAR1P56945 870 aa6.19□□□□□ -1.42
BRCA1-217ENST00000487825 PCBP1Q15365 356 aaKnown RBP eCLIP6.19□□□□□ -1.42
BRCA1-217ENST00000487825 SPTY2D1Q68D10 685 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms