RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 CATIPQ7Z7H3 387 aa13.63□□□□□ -0.23
ATPAF1-205ENST00000487193 SMAP1Q8IYB5 467 aaPredicted RBP13.63□□□□□ -0.23
ATPAF1-205ENST00000487193 HS6ST3Q8IZP7 471 aa13.63□□□□□ -0.23
ATPAF1-205ENST00000487193 HDDC3Q8N4P3 179 aa13.63□□□□□ -0.23
ATPAF1-205ENST00000487193 CNNM3Q8NE01 707 aa13.63□□□□□ -0.23
ATPAF1-205ENST00000487193 RSPRY1Q96DX4 576 aa13.63□□□□□ -0.23
ATPAF1-205ENST00000487193 IFT122Q9HBG6 1241 aa13.63□□□□□ -0.23
ATPAF1-205ENST00000487193 TMEM150BA6NC51 233 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 UPK3BL1B0FP48 263 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 UPK3BL2E5RIL1 263 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 FAM86B1E9PN63 330 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 CAPN9O14815 690 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 FAM86B2P0C5J1 330 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 ABCG1P45844 678 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 DGKEP52429 567 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 CFHR1Q03591 330 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 CYP4A22Q5TCH4 519 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 RTL10Q7L3V2 364 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 ADAMTS14Q8WXS8 1223 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 CAMK1GQ96NX5 476 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 GTPBP2Q9BX10 602 aaKnown RBP13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 ANO3Q9BYT9 981 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 SLITRK6Q9H5Y7 841 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 FSCN3Q9NQT6 498 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 TBC1D22BQ9NU19 505 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 KLK14Q9P0G3 267 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 CDY1Q9Y6F8 540 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 PIEZO2Q9H5I5 2752 aa13.62□□□□□ -0.23
ATPAF1-205ENST00000487193 APC2O95996 2303 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 A0A087WV48 116 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 PRRG1O14668 218 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 MICAL2O94851 1124 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 PLEKHA8P1O95397 391 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 SRGAP2CP0DJJ0 459 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 MYL4P12829 197 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 AKAP5P24588 427 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 ELF1P32519 619 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 ATXN3P54252 364 aaPredicted RBP13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 TRIP6Q15654 476 aaKnown RBP13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 UGCGQ16739 394 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 NIPA1Q7RTP0 329 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 HEATR3Q7Z4Q2 680 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 SRBD1Q8N5C6 995 aaKnown RBP13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 TMEM209Q96SK2 561 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 MINDY3Q9H8M7 445 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 TRPV4Q9HBA0 871 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 SEPT9Q9UHD8 586 aaPredicted RBP13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 EVLQ9UI08 416 aaPredicted RBP13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 PCDHB9Q9Y5E1 797 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 STK24Q9Y6E0 443 aa13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 USP9XQ93008 2570 aaPredicted RBP13.61□□□□□ -0.23
ATPAF1-205ENST00000487193 CASTOR2A6NHX0 329 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 RNF40O75150 1001 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 MOSPD3O75425 235 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 KIF4AO95239 1232 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 FTH1P19P0C7X4 201 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 BCKDHBP21953 392 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 ITPKBP27987 946 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 TNK2Q07912 1038 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 SPIRE1Q08AE8 756 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 TEAD2Q15562 447 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 TARBP2Q15633 366 aaKnown RBP13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 USP39Q53GS9 565 aaKnown RBP13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 PDXDC1Q6P996 788 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 MARCH9Q86YJ5 346 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 SCUBE3Q8IX30 993 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 CCDC82Q8N4S0 544 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 LSM14AQ8ND56 463 aaKnown RBP13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 GSTCDQ8NEC7 633 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 RILPL2Q969X0 211 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 E2F7Q96AV8 911 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 CPB2Q96IY4 423 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 TPSD1Q9BZJ3 242 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 CFAP46Q8IYW2 2715 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 PTPRBP23467 1997 aa13.6□□□□□ -0.23
ATPAF1-205ENST00000487193 IGKV6-21A0A0C4DH24 114 aa13.59□□□□□ -0.23
ATPAF1-205ENST00000487193 ARHGEF37A1IGU5 675 aa13.59□□□□□ -0.23
ATPAF1-205ENST00000487193 OPHN1O60890 802 aa13.59□□□□□ -0.23
ATPAF1-205ENST00000487193 APBB3O95704 486 aa13.59□□□□□ -0.23
ATPAF1-205ENST00000487193 FCHO2Q0JRZ9 810 aa13.59□□□□□ -0.23
ATPAF1-205ENST00000487193 GRSF1Q12849 480 aaKnown RBP eCLIP13.59□□□□□ -0.23
ATPAF1-205ENST00000487193 FSTL4Q6MZW2 842 aa13.59□□□□□ -0.23
ATPAF1-205ENST00000487193 ARMCX6Q7L4S7 300 aa13.59□□□□□ -0.23
ATPAF1-205ENST00000487193 DISC1Q9NRI5 854 aa13.59□□□□□ -0.23
ATPAF1-205ENST00000487193 TMEM74BQ9NUR3 256 aa13.59□□□□□ -0.23
ATPAF1-205ENST00000487193 GIT1Q9Y2X7 761 aa13.59□□□□□ -0.23
ATPAF1-205ENST00000487193 IGLV3-22A0A075B6J6 115 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 WDR64B1ANS9 1081 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 FOSP01100 380 aaPredicted RBP13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 EGFP01133 1207 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 CFIP05156 583 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 SMARCA1P28370 1054 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 ARPP19P56211 112 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 GRIK3Q13003 919 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 TRDNQ13061 729 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 HAUS6Q7Z4H7 955 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 OR2I1PQ8NGU4 316 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 LRRC3BQ96PB8 259 aa13.58□□□□□ -0.24
ATPAF1-205ENST00000487193 CEP89Q96ST8 783 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms