RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 PASKQ96RG2 1323 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 TLDC2A0PJX2 215 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 C5orf60A6NFR6 353 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 RIPK2O43353 540 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 ECEL1O95672 775 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 C4BPAP04003 597 aaKnown RBP13.18□□□□□ -0.3
PTCD2-204ENST00000486995 FGFR4P22455 802 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 RRM1P23921 792 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 IFT88Q13099 833 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 SLMAPQ14BN4 828 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 PSMD6Q15008 389 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 ZACNQ401N2 412 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 CENPTQ96BT3 561 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 TMEM109Q9BVC6 243 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 ADAM7Q9H2U9 754 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 AZI2Q9H6S1 392 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 ZNF112Q9UJU3 913 aa13.18□□□□□ -0.3
PTCD2-204ENST00000486995 PARP14Q460N5 1801 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 SPATA31C2B4DYI2 1134 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 RPS12P25398 132 aaKnown RBP13.17□□□□□ -0.3
PTCD2-204ENST00000486995 MMP13P45452 471 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 LIG4P49917 911 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 HMGCS2P54868 508 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 NLRP11P59045 1033 aaKnown RBP13.17□□□□□ -0.3
PTCD2-204ENST00000486995 IFI35P80217 286 aaPredicted RBP13.17□□□□□ -0.3
PTCD2-204ENST00000486995 SP2Q02086 613 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 ZNF568Q3ZCX4 644 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 MTERF2Q49AM1 385 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 ERMARDQ5T6L9 678 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 TDRD10Q5VZ19 366 aaKnown RBP13.17□□□□□ -0.3
PTCD2-204ENST00000486995 LLGL2Q6P1M3 1020 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 PHLDB2Q86SQ0 1253 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 ZNF677Q86XU0 584 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 MICALL2Q8IY33 904 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 UHMK1Q8TAS1 419 aaKnown RBP13.17□□□□□ -0.3
PTCD2-204ENST00000486995 FAM81BQ96LP2 452 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 HERPUD2Q9BSE4 406 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 HAPLN2Q9GZV7 340 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 KIAA1586Q9HCI6 787 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
PTCD2-204ENST00000486995 FZD1Q9UP38 647 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 HLA-DRAP01903 254 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 CYP1A1P04798 512 aaPredicted RBP13.17□□□□□ -0.3
PTCD2-204ENST00000486995 ATP4AP20648 1035 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 ACOT2P49753 483 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 MKRN4PQ13434 485 aaPredicted RBP13.17□□□□□ -0.3
PTCD2-204ENST00000486995 C2CD6Q53TS8 623 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 SGO2Q562F6 1265 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 XKR3Q5GH77 459 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 C6orf118Q5T5N4 469 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 SPOPLQ6IQ16 392 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
PTCD2-204ENST00000486995 CDHR1Q96JP9 859 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 XPO6Q96QU8 1125 aaKnown RBP13.17□□□□□ -0.3
PTCD2-204ENST00000486995 PLVAPQ9BX97 442 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 AS3MTQ9HBK9 375 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 CHST7Q9NS84 486 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 PTPRJQ12913 1337 aa13.17□□□□□ -0.3
PTCD2-204ENST00000486995 RLFQ13129 1914 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 SMIM23A6NLE4 172 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 H0YCG3 227 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 RGS16O15492 202 aaPredicted RBP13.16□□□□□ -0.3
PTCD2-204ENST00000486995 FSBPO95073 299 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 VNN1O95497 513 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 TNNI1P19237 187 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 ACO1P21399 889 aaKnown RBP13.16□□□□□ -0.3
PTCD2-204ENST00000486995 CENPCQ03188 943 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 ADCY2Q08462 1091 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 PPP1R7Q15435 360 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 TNFAIP8L3Q5GJ75 292 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 WDR44Q5JSH3 913 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 MIS18BP1Q6P0N0 1132 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 EPS8L3Q8TE67 593 aaKnown RBP13.16□□□□□ -0.3
PTCD2-204ENST00000486995 TMEM143Q96AN5 459 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
PTCD2-204ENST00000486995 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 FNBP1Q96RU3 617 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 FAM129AQ9BZQ8 928 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 AAASQ9NRG9 546 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 CFHP08603 1231 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 SUPT20HL2P0C7V6 817 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 MYBL1P10243 752 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 CHN1P15882 459 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 DRD4P21917 467 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 SLC1A1P43005 524 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 GMPSP49915 693 aaPredicted RBP13.16□□□□□ -0.3
PTCD2-204ENST00000486995 KRT17Q04695 432 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 SNX1Q13596 522 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 EMC2Q15006 297 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 SUPT20HL1Q3ZLR7 823 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 RNF187Q5TA31 235 aaPredicted RBP13.16□□□□□ -0.3
PTCD2-204ENST00000486995 PRAMEF18Q5VWM3 479 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 DCAF15Q66K64 600 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 MON1BQ7L1V2 547 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 ZNF526Q8TF50 670 aaPredicted RBP13.16□□□□□ -0.3
PTCD2-204ENST00000486995 SEC16BQ96JE7 1060 aa13.16□□□□□ -0.3
PTCD2-204ENST00000486995 WRNIP1Q96S55 665 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms