RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ERVFC1P60507 584 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 HMGN5P82970 282 aaKnown RBP7.61□□□□□ -1.19
HDAC3-209ENST00000486618 ARID5AQ03989 594 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 TRDNQ13061 729 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 GRM4Q14833 912 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 MARCH8Q5T0T0 291 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 KLHL10Q6JEL2 608 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 PSAPL1Q6NUJ1 521 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 C16orf46Q6P387 395 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 TMEM87AQ8NBN3 555 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 CASP10Q92851 521 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 GPRASP2Q96D09 838 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 DSCC1Q9BVC3 393 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 SRRTQ9BXP5 876 aaKnown RBP7.61□□□□□ -1.19
HDAC3-209ENST00000486618 CELF4Q9BZC1 486 aaKnown RBP7.61□□□□□ -1.19
HDAC3-209ENST00000486618 MFSD1Q9H3U5 465 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 AZI2Q9H6S1 392 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 SUDS3Q9H7L9 328 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-209ENST00000486618 NGRNQ9NPE2 291 aaKnown RBP7.61□□□□□ -1.19
HDAC3-209ENST00000486618 C1orf112Q9NSG2 853 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 DIAPH3Q9NSV4 1193 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 ZNF69Q9UC07 566 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 PCDHGC5Q9Y5F6 944 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 PCDHA2Q9Y5H9 948 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 FNDC1Q4ZHG4 1894 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-209ENST00000486618 KDM3AQ9Y4C1 1321 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 TPRP12270 2363 aaKnown RBP7.6□□□□□ -1.19
HDAC3-209ENST00000486618 SMIM35A0A1B0GVV1 85 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 GSTTP1A0A1W2PQM5 241 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 DENND3A2RUS2 1198 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 TBKBP1A7MCY6 615 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 HIP1O00291 1037 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 FSCN2O14926 492 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 RNASEH2AO75792 299 aaKnown RBP7.6□□□□□ -1.19
HDAC3-209ENST00000486618 SASH3O75995 380 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 MYL1P05976 194 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 FURINP09958 794 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 RARAP10276 462 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 KCNA2P16389 499 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 LAG3P18627 525 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 MTHFRP42898 656 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 CLK1P49759 484 aaKnown RBP7.6□□□□□ -1.19
HDAC3-209ENST00000486618 GATMP50440 423 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 PLCB3Q01970 1234 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 KRT17Q04695 432 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 ITIH3Q06033 890 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 KCNC3Q14003 757 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 SEC23AQ15436 765 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 TMEM95Q3KNT9 176 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 CCDC70Q6NSX1 233 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 SYCE2Q6PIF2 218 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 CAPN12Q6ZSI9 719 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 SLC24A5Q71RS6 500 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 DHX32Q7L7V1 743 aaKnown RBP7.6□□□□□ -1.19
HDAC3-209ENST00000486618 FRMD5Q7Z6J6 570 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 CATIPQ7Z7H3 387 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 RGL4Q8IZJ4 473 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 ADSSL1Q8N142 457 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 TMEM105Q8N8V8 129 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 COLGALT1Q8NBJ5 622 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 VN1R2Q8NFZ6 395 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 MRPS27Q92552 414 aaKnown RBP7.6□□□□□ -1.19
HDAC3-209ENST00000486618 ITFG2Q969R8 447 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 COL26A1Q96A83 441 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 ERP27Q96DN0 273 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 MKNK1Q9BUB5 465 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 ENTPD7Q9NQZ7 604 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 FAM13BQ9NYF5 915 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 TELO2Q9Y4R8 837 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 EVPLQ92817 2033 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 USP34Q70CQ2 3546 aa7.6□□□□□ -1.19
HDAC3-209ENST00000486618 ZBTB42B2RXF5 422 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 K7ELQ4 463 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-209ENST00000486618 PES1O00541 588 aaKnown RBP7.59□□□□□ -1.19
HDAC3-209ENST00000486618 IFIT3O14879 490 aaKnown RBP7.59□□□□□ -1.19
HDAC3-209ENST00000486618 GPR182O15218 404 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 ATP9AO75110 1047 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 RPS6KA5O75582 802 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 BPNT1O95861 308 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 TPM2P07951 284 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 RBP3P10745 1247 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 CPB1P15086 417 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 SP100P23497 879 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-209ENST00000486618 PPM1AP35813 382 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 AFF1P51825 1210 aaKnown RBP7.59□□□□□ -1.19
HDAC3-209ENST00000486618 TMEM62Q0P6H9 643 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 WASHC5Q12768 1159 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 MTMR1Q13613 665 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 SART3Q15020 963 aaKnown RBP7.59□□□□□ -1.19
HDAC3-209ENST00000486618 LONRF1Q17RB8 773 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 PLPP4Q5VZY2 271 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 LLGL2Q6P1M3 1020 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 USP17L6PQ6QN14 398 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 CWC27Q6UX04 472 aaKnown RBP7.59□□□□□ -1.19
HDAC3-209ENST00000486618 TMC7Q7Z402 723 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 FAM35AQ86V20 835 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 ETFBKMTQ8IXQ9 262 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 NDUFAF2Q8N183 169 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 RNF34Q969K3 372 aa7.59□□□□□ -1.19
HDAC3-209ENST00000486618 RRP36Q96EU6 259 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms