RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 APBB1IPQ7Z5R6 666 aaPredicted RBP23.3■■□□□ 1.32
TRADD-202ENST00000486556 C7orf31Q8N865 590 aa23.3■■□□□ 1.32
TRADD-202ENST00000486556 OLIG1Q8TAK6 271 aa23.3■■□□□ 1.32
TRADD-202ENST00000486556 U2AF1L4Q8WU68 220 aaKnown RBP23.3■■□□□ 1.32
TRADD-202ENST00000486556 FAM212AQ96EL1 285 aa23.3■■□□□ 1.32
TRADD-202ENST00000486556 ADPGKQ9BRR6 497 aa23.3■■□□□ 1.32
TRADD-202ENST00000486556 MTG1Q9BT17 334 aaPredicted RBP23.3■■□□□ 1.32
TRADD-202ENST00000486556 IMPG2Q9BZV3 1241 aa23.3■■□□□ 1.32
TRADD-202ENST00000486556 FAM49AQ9H0Q0 323 aaPredicted RBP23.3■■□□□ 1.32
TRADD-202ENST00000486556 RARBP10826 455 aa23.29■■□□□ 1.32
TRADD-202ENST00000486556 MAP2K2P36507 400 aa23.29■■□□□ 1.32
TRADD-202ENST00000486556 TRAPPC11Q7Z392 1133 aa23.29■■□□□ 1.32
TRADD-202ENST00000486556 CDR2LQ86X02 465 aaPredicted RBP23.29■■□□□ 1.32
TRADD-202ENST00000486556 DHX38Q92620 1227 aaKnown RBP23.29■■□□□ 1.32
TRADD-202ENST00000486556 ASB7Q9H672 318 aa23.29■■□□□ 1.32
TRADD-202ENST00000486556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.29■■□□□ 1.32
TRADD-202ENST00000486556 SALL4Q9UJQ4 1053 aa23.29■■□□□ 1.32
TRADD-202ENST00000486556 CYP26A1O43174 497 aa23.29■■□□□ 1.32
TRADD-202ENST00000486556 MOCS3O95396 460 aa23.29■■□□□ 1.32
TRADD-202ENST00000486556 STAG3L1P0CL83 205 aa23.29■■□□□ 1.32
TRADD-202ENST00000486556 CACNB2Q08289 660 aaPredicted RBP23.29■■□□□ 1.32
TRADD-202ENST00000486556 IFI16Q16666 785 aaKnown RBP23.29■■□□□ 1.32
TRADD-202ENST00000486556 ANKRD36BP1Q96IX9 119 aa23.29■■□□□ 1.32
TRADD-202ENST00000486556 CPB2Q96IY4 423 aa23.29■■□□□ 1.32
TRADD-202ENST00000486556 HDAC6Q9UBN7 1215 aa23.29■■□□□ 1.32
TRADD-202ENST00000486556 A0A0A6YYK5 440 aaPredicted RBP23.28■■□□□ 1.32
TRADD-202ENST00000486556 TREHO43280 583 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 TNNC2P02585 160 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 BPIFB4P59827 614 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 OSTNP61366 133 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 AMPD2Q01433 879 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 HIC1Q14526 733 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 SGSM1Q2NKQ1 1148 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 RUFY4Q6ZNE9 571 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 CEP120Q8N960 986 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 MNS1Q8NEH6 495 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 EPS8L1Q8TE68 723 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 PACSIN1Q9BY11 444 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 CAPN6Q9Y6Q1 641 aa23.28■■□□□ 1.32
TRADD-202ENST00000486556 SGPL1O95470 568 aa23.27■■□□□ 1.32
TRADD-202ENST00000486556 TMEM191BP0C7N4 346 aa23.27■■□□□ 1.32
TRADD-202ENST00000486556 DARSP14868 501 aaKnown RBP23.27■■□□□ 1.32
TRADD-202ENST00000486556 NAP1L1P55209 391 aaKnown RBP23.27■■□□□ 1.32
TRADD-202ENST00000486556 DCAF4L1Q3SXM0 396 aa23.27■■□□□ 1.32
TRADD-202ENST00000486556 DNAJB3Q8WWF6 145 aa23.27■■□□□ 1.32
TRADD-202ENST00000486556 FAM84AQ96KN4 292 aa23.27■■□□□ 1.32
TRADD-202ENST00000486556 RNF186Q9NXI6 227 aa23.27■■□□□ 1.32
TRADD-202ENST00000486556 NOCTQ9UK39 431 aaKnown RBP23.27■■□□□ 1.32
TRADD-202ENST00000486556 SAR1BQ9Y6B6 198 aa23.27■■□□□ 1.32
TRADD-202ENST00000486556 CASP8AP2Q9UKL3 1982 aa23.27■■□□□ 1.32
TRADD-202ENST00000486556 ASS1P00966 412 aaKnown RBP23.26■■□□□ 1.31
TRADD-202ENST00000486556 CST3P01034 146 aaPredicted RBP23.26■■□□□ 1.31
TRADD-202ENST00000486556 GZMAP12544 262 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 CYP11B1P15538 503 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 EIF4BP23588 611 aaKnown RBP23.26■■□□□ 1.31
TRADD-202ENST00000486556 AXLP30530 894 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 NOP14P78316 857 aaKnown RBP23.26■■□□□ 1.31
TRADD-202ENST00000486556 CUL2Q13617 745 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 MTMR12Q9C0I1 747 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 APOBEC3GQ9HC16 384 aaKnown RBP23.26■■□□□ 1.31
TRADD-202ENST00000486556 SRRDQ9UH36 339 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 MYADML2A6NDP7 307 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 TMEM253P0C7T8 217 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 CXCL8P10145 99 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 PRLRP16471 622 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 PDE6CP51160 858 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 TFAMQ00059 246 aaKnown RBP23.26■■□□□ 1.31
TRADD-202ENST00000486556 TRPC3Q13507 836 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 WHAMMP3Q1A5X7 153 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 TAF2Q6P1X5 1199 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 CATSPER4Q7RTX7 472 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 SLC47A2Q86VL8 602 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 CD302Q8IX05 232 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 RPUSD2Q8IZ73 545 aaKnown RBP23.26■■□□□ 1.31
TRADD-202ENST00000486556 CEP112Q8N8E3 955 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 CARD6Q9BX69 1037 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 ISCUQ9H1K1 167 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 PCDHGC5Q9Y5F6 944 aa23.26■■□□□ 1.31
TRADD-202ENST00000486556 ENC1O14682 589 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 BUB1O43683 1085 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 TRPA1O75762 1119 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 GNRH1P01148 92 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 ATP1A1P05023 1023 aaKnown RBP23.25■■□□□ 1.31
TRADD-202ENST00000486556 GALCP54803 685 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 CDR2Q01850 454 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 TMEM62Q0P6H9 643 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 NOP9Q86U38 636 aaKnown RBP23.25■■□□□ 1.31
TRADD-202ENST00000486556 ZNF677Q86XU0 584 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 EFCAB13Q8IY85 973 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 SLC20A1Q8WUM9 679 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 TAF4BQ92750 862 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 FAXDC2Q96IV6 333 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 ACAP3Q96P50 834 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 OSMRQ99650 979 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 CDHR5Q9HBB8 845 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 SEPT11Q9NVA2 429 aaKnown RBP23.25■■□□□ 1.31
TRADD-202ENST00000486556 CNTN6Q9UQ52 1028 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 GINS2Q9Y248 185 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 PCDHB2Q9Y5E7 798 aa23.25■■□□□ 1.31
TRADD-202ENST00000486556 ANKRD62A6NC57 917 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms