RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 MANSC4A6NHS7 340 aaPredicted RBP12.84□□□□□ -0.35
PKP4-213ENST00000486254 CELF2O95319 508 aaKnown RBP12.84□□□□□ -0.35
PKP4-213ENST00000486254 HSPA6P17066 643 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 ACO1P21399 889 aaKnown RBP12.84□□□□□ -0.35
PKP4-213ENST00000486254 TMOD1P28289 359 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 NOP14P78316 857 aaKnown RBP12.84□□□□□ -0.35
PKP4-213ENST00000486254 CDC42EP1Q00587 391 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 TNFAIP2Q03169 654 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 C2orf54Q08AI8 447 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 BIRC3Q13489 604 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 PCBP1Q15365 356 aaKnown RBP eCLIP12.84□□□□□ -0.35
PKP4-213ENST00000486254 CLEC16AQ2KHT3 1053 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 ATF7IP2Q5U623 682 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 EFCAB12Q6NXP0 572 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 C8orf74Q6P047 294 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 ZNF410Q86VK4 478 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 UBR7Q8N806 425 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 TATDN2Q93075 761 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 ZBTB45Q96K62 511 aaPredicted RBP12.84□□□□□ -0.35
PKP4-213ENST00000486254 PCDHB18PQ96TA0 734 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 ACBD3Q9H3P7 528 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 SUGCTQ9HAC7 445 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 TAS2R14Q9NYV8 317 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 PTPRJQ12913 1337 aa12.84□□□□□ -0.35
PKP4-213ENST00000486254 KCNK3O14649 394 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 CYP1A1P04798 512 aaPredicted RBP12.83□□□□□ -0.36
PKP4-213ENST00000486254 MCF2P10911 925 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 UNGP13051 313 aaPredicted RBP12.83□□□□□ -0.36
PKP4-213ENST00000486254 INSRRP14616 1297 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 CXCR5P32302 372 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 USP8P40818 1118 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 MATR3P43243 847 aaKnown RBP eCLIP12.83□□□□□ -0.36
PKP4-213ENST00000486254 ZNF132P52740 706 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 WNT7BP56706 349 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 CENPCQ03188 943 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 NNTQ13423 1086 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 NCOA4Q13772 614 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 DUOXA2Q1HG44 320 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 ACAD10Q6JQN1 1059 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 CCNI2Q6ZMN8 369 aaPredicted RBP12.83□□□□□ -0.36
PKP4-213ENST00000486254 DPP9Q86TI2 863 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 RHPN2Q8IUC4 686 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 LRRC71Q8N4P6 559 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 METTL13Q8N6R0 699 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 ARHGEF26Q96DR7 871 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 PTPN18Q99952 460 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 SLITRK6Q9H5Y7 841 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 RBM12Q9NTZ6 932 aaKnown RBP12.83□□□□□ -0.36
PKP4-213ENST00000486254 SEPT11Q9NVA2 429 aaKnown RBP12.83□□□□□ -0.36
PKP4-213ENST00000486254 LCMT1Q9UIC8 334 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 KAT6AQ92794 2004 aa12.83□□□□□ -0.36
PKP4-213ENST00000486254 RRN3P2A6NIE6 340 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 ZEB2O60315 1214 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 SASH3O75995 380 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 SEC31AO94979 1220 aaKnown RBP12.82□□□□□ -0.36
PKP4-213ENST00000486254 MMEP08473 750 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 SRGAP2CP0DJJ0 459 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 ABCB4P21439 1286 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 YWHAEP62258 255 aaKnown RBP12.82□□□□□ -0.36
PKP4-213ENST00000486254 GABPB1Q06547 395 aaPredicted RBP12.82□□□□□ -0.36
PKP4-213ENST00000486254 GPS2Q13227 327 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 ACVR2BQ13705 512 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 DGKDQ16760 1214 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 SGSM1Q2NKQ1 1148 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 ZBTB41Q5SVQ8 909 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 MORN1Q5T089 497 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 EMBQ6PCB8 327 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 NT5DC4Q86YG4 428 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 AFG1LQ8WV93 481 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 WNT8AQ9H1J5 351 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 RNPEPQ9H4A4 650 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 IFT122Q9HBG6 1241 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 OSGEPQ9NPF4 335 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 COG5Q9UP83 839 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 UTRNP46939 3433 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 RALGAPA2Q2PPJ7 1873 aa12.82□□□□□ -0.36
PKP4-213ENST00000486254 BHMG1C9JSJ3 638 aaPredicted RBP12.81□□□□□ -0.36
PKP4-213ENST00000486254 H3BRB1 525 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 DDX3YO15523 660 aaKnown RBP12.81□□□□□ -0.36
PKP4-213ENST00000486254 MMP3P08254 477 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 CTNNA2P26232 953 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 ADCYAP1R1P41586 468 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 PLA2G4AP47712 749 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 CLCN3P51790 818 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 AMHR2Q16671 573 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 ZNF568Q3ZCX4 644 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 IFT20Q8IY31 132 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 UBL4BQ8N7F7 174 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 AENQ8WTP8 325 aaKnown RBP12.81□□□□□ -0.36
PKP4-213ENST00000486254 PSMB7Q99436 277 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 TCHPQ9BT92 498 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 LRRC1Q9BTT6 524 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 NIF3L1Q9GZT8 377 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 ASB7Q9H672 318 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 TUT1Q9H6E5 874 aaKnown RBP12.81□□□□□ -0.36
PKP4-213ENST00000486254 VRTNQ9H8Y1 702 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 GDF3Q9NR23 364 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 CTTNBP2NLQ9P2B4 639 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 Q9Y3F1 56 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 NOC2LQ9Y3T9 749 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms