RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 FAM167AQ96KS9 214 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 CEP89Q96ST8 783 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 DSCC1Q9BVC3 393 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 TRMT61BQ9BVS5 477 aaKnown RBP9.28□□□□□ -0.92
XRN1-212ENST00000486211 AVENQ9NQS1 362 aaPredicted RBP9.28□□□□□ -0.92
XRN1-212ENST00000486211 MIOSQ9NXC5 875 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 SEC63Q9UGP8 760 aaKnown RBP9.28□□□□□ -0.92
XRN1-212ENST00000486211 MRPS23Q9Y3D9 190 aaKnown RBP9.28□□□□□ -0.92
XRN1-212ENST00000486211 EML5Q05BV3 1969 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 NCANO14594 1321 aa9.28□□□□□ -0.92
XRN1-212ENST00000486211 IGLV3-22A0A075B6J6 115 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 IGKV6-21A0A0C4DH24 114 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 CCDC163A0A0D9SF12 145 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 ARL5CA6NH57 179 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 IPO5O00410 1097 aaKnown RBP9.27□□□□□ -0.93
XRN1-212ENST00000486211 CDX4O14627 284 aaPredicted RBP9.27□□□□□ -0.93
XRN1-212ENST00000486211 IFIT3O14879 490 aaKnown RBP9.27□□□□□ -0.93
XRN1-212ENST00000486211 AKAP3O75969 853 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 PLEKHA8P1O95397 391 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 PSAPP07602 524 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 RHOP08100 348 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 SDSP20132 328 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 GDI1P31150 447 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 HOXA11P31270 313 aaPredicted RBP9.27□□□□□ -0.93
XRN1-212ENST00000486211 SREBF1P36956 1147 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 PXNP49023 591 aaPredicted RBP9.27□□□□□ -0.93
XRN1-212ENST00000486211 MLLT6P55198 1093 aaPredicted RBP9.27□□□□□ -0.93
XRN1-212ENST00000486211 LRRC32Q14392 662 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 PLK5Q496M5 336 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 FAM78AQ5JUQ0 283 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 VITQ6UXI7 678 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 CATSPER4Q7RTX7 472 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 ZNF410Q86VK4 478 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 SMAP1Q8IYB5 467 aaPredicted RBP9.27□□□□□ -0.93
XRN1-212ENST00000486211 DEFB124Q8NES8 71 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 GAD1Q99259 594 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 MAP3K14Q99558 947 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 ANO3Q9BYT9 981 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 ATP13A2Q9NQ11 1180 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 ADAM28Q9UKQ2 775 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 PCDHA10Q9Y5I2 948 aa9.27□□□□□ -0.93
XRN1-212ENST00000486211 hCG_1642624A0A1W2PR95 340 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 EXTL3O43909 919 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 C1QL1O75973 258 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 MLH1P40692 756 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 SCNN1GP51170 649 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 CDC42EP1Q00587 391 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 PRKCEQ02156 737 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 GUCA2AQ02747 115 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 AMHR2Q16671 573 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 UGCGQ16739 394 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 UVSSAQ2YD98 709 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 PRSS36Q5K4E3 855 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 AXDND1Q5T1B0 1012 aaPredicted RBP9.26□□□□□ -0.93
XRN1-212ENST00000486211 TXNDC11Q6PKC3 985 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 CATIPQ7Z7H3 387 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 PLA2G4DQ86XP0 818 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 KSR1Q8IVT5 923 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 CMTR1Q8N1G2 835 aaKnown RBP9.26□□□□□ -0.93
XRN1-212ENST00000486211 GSTCDQ8NEC7 633 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 LNX1Q8TBB1 728 aaPredicted RBP9.26□□□□□ -0.93
XRN1-212ENST00000486211 CRYGNQ8WXF5 182 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 PIK3R5Q8WYR1 880 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 ZFP42Q96MM3 310 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 ASB16Q96NS5 453 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 COLEC11Q9BWP8 271 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 INO80BQ9C086 356 aaPredicted RBP9.26□□□□□ -0.93
XRN1-212ENST00000486211 DUSP15Q9H1R2 295 aaPredicted RBP9.26□□□□□ -0.93
XRN1-212ENST00000486211 IFT122Q9HBG6 1241 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 ZFP14Q9HCL3 533 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 PCDHB15Q9Y5E8 787 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 TENM4Q6N022 2769 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 CELSR3Q9NYQ7 3312 aa9.26□□□□□ -0.93
XRN1-212ENST00000486211 PDCD11Q14690 1871 aaKnown RBP9.25□□□□□ -0.93
XRN1-212ENST00000486211 TDRD15B5MCY1 1934 aaKnown RBP9.25□□□□□ -0.93
XRN1-212ENST00000486211 BCLAF3A2AJT9 711 aaKnown RBP9.25□□□□□ -0.93
XRN1-212ENST00000486211 EIF4E1BA6NMX2 242 aaKnown RBP9.25□□□□□ -0.93
XRN1-212ENST00000486211 CAVIN2O95810 425 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 PRB1P04280 392 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 CCDC192P0DO97 292 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 PLA2G2AP14555 144 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 PSMC3P17980 439 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 SOX9P48436 509 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 FGD1P98174 961 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 SCAPQ12770 1279 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 CCINQ13939 588 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 PSMD5Q16401 504 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 DGKKQ5KSL6 1271 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 PKN3Q6P5Z2 889 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 IGDCC4Q8TDY8 1250 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 RABGGTAQ92696 567 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 TCEAL4Q96EI5 215 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 MSANTD3Q96H12 275 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 ZSWIM3Q96MP5 696 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 LZTS2Q9BRK4 669 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 UBN1Q9NPG3 1134 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 TMEM9BQ9NQ34 198 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 IGSF5Q9NSI5 407 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 NRBP2Q9NSY0 501 aa9.25□□□□□ -0.93
XRN1-212ENST00000486211 TBC1D22BQ9NU19 505 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms