RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 GLYCTKQ8IVS8 523 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 SUSD6Q92537 303 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 KHSRPQ92945 711 aaKnown RBP eCLIP20.1■□□□□ 0.81
COL1A1-206ENST00000485870 C18orf25Q96B23 403 aaPredicted RBP20.1■□□□□ 0.81
COL1A1-206ENST00000485870 CHAMP1Q96JM3 812 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 FBXL18Q96ME1 805 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 POP1Q99575 1024 aaKnown RBP20.1■□□□□ 0.81
COL1A1-206ENST00000485870 ST6GALNAC4Q9H4F1 302 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 RXFP1Q9HBX9 757 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 SLC38A7Q9NVC3 462 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 TISP43B9A030 160 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 ANKRD63C9JTQ0 380 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 CLTAP09496 248 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 RPL17P18621 184 aaKnown RBP20.09■□□□□ 0.81
COL1A1-206ENST00000485870 BECN1Q14457 450 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 CBX2Q14781 532 aaPredicted RBP20.09■□□□□ 0.81
COL1A1-206ENST00000485870 UPP1Q16831 310 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 HERC4Q5GLZ8 1057 aaPredicted RBP20.09■□□□□ 0.81
COL1A1-206ENST00000485870 ZBTB41Q5SVQ8 909 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 DCLRE1AQ6PJP8 1040 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 PRSS55Q6UWB4 352 aaPredicted RBP20.09■□□□□ 0.81
COL1A1-206ENST00000485870 TTPALQ9BTX7 342 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 MSTO1Q9BUK6 570 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 TNMDQ9H2S6 317 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 IKZF4Q9H2S9 585 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 PANK4Q9NVE7 773 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 PLXNA3P51805 1871 aa20.09■□□□□ 0.81
COL1A1-206ENST00000485870 PDCD11Q14690 1871 aaKnown RBP20.09■□□□□ 0.81
COL1A1-206ENST00000485870 VWA8A3KMH1 1905 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 A0A0B4J269 797 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 C19orf67A6NJJ6 358 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 TMEM189-UBE2V1I3L0A0 370 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 PODXLO00592 558 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 OGTO15294 1046 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 GCNT3O95395 438 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 WEE2P0C1S8 567 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 MYBP10242 640 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 SPAG1Q07617 926 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 ELAVL2Q12926 359 aaKnown RBP20.08■□□□□ 0.81
COL1A1-206ENST00000485870 CES5AQ6NT32 575 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 IQUBQ8NA54 791 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 C3orf58Q8NDZ4 430 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 PHF7Q9BWX1 381 aaPredicted RBP20.08■□□□□ 0.81
COL1A1-206ENST00000485870 ADAM7Q9H2U9 754 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 CUEDC2Q9H467 287 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.08■□□□□ 0.81
COL1A1-206ENST00000485870 FAM13BQ9NYF5 915 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 RCOR1Q9UKL0 485 aa20.08■□□□□ 0.81
COL1A1-206ENST00000485870 FRMD3A2A2Y4 597 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 I3L4J1 428 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 POLR2DO15514 142 aaKnown RBP20.07■□□□□ 0.8
COL1A1-206ENST00000485870 FAM189A1O60320 539 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 PPP1R37O75864 691 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 GLUD1P00367 558 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 CASP5P51878 434 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 ITIH3Q06033 890 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 KYAT1Q16773 422 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 RESP18Q5W5W9 173 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 CD300LGQ6UXG3 332 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 TMC5Q6UXY8 1006 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 PALB2Q86YC2 1186 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 CCDC65Q8IXS2 484 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 HVCN1Q96D96 273 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 DDX27Q96GQ7 796 aaKnown RBP20.07■□□□□ 0.8
COL1A1-206ENST00000485870 RPGRIP1Q96KN7 1286 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 FGFBP2Q9BYJ0 223 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 LRRC27Q9C0I9 530 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 SFXN1Q9H9B4 322 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 PLEKHA5Q9HAU0 1116 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 MAN1C1Q9NR34 630 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 KBTBD4Q9NVX7 518 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 FNIP2Q9P278 1114 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 TUBGCP4Q9UGJ1 667 aa20.07■□□□□ 0.8
COL1A1-206ENST00000485870 TTC26A0AVF1 554 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 SPATA31D3P0C874 917 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 BRCC3P46736 316 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 KRT85P78386 507 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 CREMQ03060 361 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 PPP2R3AQ06190 1150 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 KCNA1Q09470 495 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 ENOX2Q16206 610 aaKnown RBP20.06■□□□□ 0.8
COL1A1-206ENST00000485870 PSMD5Q16401 504 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 L1TD1Q5T7N2 865 aaKnown RBP20.06■□□□□ 0.8
COL1A1-206ENST00000485870 ADALQ6DHV7 355 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.06■□□□□ 0.8
COL1A1-206ENST00000485870 SPATA31D4Q6ZUB0 917 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 GPR65Q8IYL9 337 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 TMEM130Q8N3G9 435 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 FEZF2Q8TBJ5 459 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 PIK3R5Q8WYR1 880 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 FAM212AQ96EL1 285 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 KIF12Q96FN5 646 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 ACCSQ96QU6 501 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 STRA6Q9BX79 667 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 EPHX3Q9H6B9 360 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 RPF1Q9H9Y2 349 aaKnown RBP20.06■□□□□ 0.8
COL1A1-206ENST00000485870 OLFML3Q9NRN5 406 aa20.06■□□□□ 0.8
COL1A1-206ENST00000485870 LACTBL1A8MY62 500 aa20.05■□□□□ 0.8
COL1A1-206ENST00000485870 SP100P23497 879 aaPredicted RBP20.05■□□□□ 0.8
COL1A1-206ENST00000485870 ASIC1P78348 528 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms