RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 CERS4Q9HA82 394 aa13.78□□□□□ -0.2
HDAC7-223ENST00000485796 GBF1Q92538 1859 aa13.78□□□□□ -0.2
HDAC7-223ENST00000485796 CASTOR2A6NHX0 329 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 NT5C1B-RDH14C9J2C7 533 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 PPEF2O14830 753 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 ANK1P16157 1881 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 SLC11A1P49279 550 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 ZNF165P49910 485 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 TAP1Q03518 808 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 PPP2R3AQ06190 1150 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 DSC1Q08554 894 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 PSMD6Q15008 389 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 KYAT1Q16773 422 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 LRIT3Q3SXY7 679 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 HSP90AA4PQ58FG1 418 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 CD300LGQ6UXG3 332 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 TMEM173Q86WV6 379 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-223ENST00000485796 COLGALT2Q8IYK4 626 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 FAM186BQ8IYM0 893 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 FIBCD1Q8N539 461 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 URGCPQ8TCY9 931 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 BCL7CQ8WUZ0 217 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-223ENST00000485796 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 LRCH3Q96II8 777 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 RPS6KC1Q96S38 1066 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 PLEKHA5Q9HAU0 1116 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 MTUS1Q9ULD2 1270 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 FRMD4BQ9Y2L6 1034 aa13.77□□□□□ -0.21
HDAC7-223ENST00000485796 A0A1W2PPC1 479 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 EPOPA6NHQ4 379 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 LRRIQ3A6PVS8 624 aaPredicted RBP13.76□□□□□ -0.21
HDAC7-223ENST00000485796 FGFR1OPO95684 399 aaKnown RBP13.76□□□□□ -0.21
HDAC7-223ENST00000485796 THP07101 528 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 GALTP07902 379 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 TRIM49P0CI25 452 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 TRIM49CP0CI26 452 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 DLATP10515 647 aaKnown RBP13.76□□□□□ -0.21
HDAC7-223ENST00000485796 DNAJB2P25686 324 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 PSMC2P35998 433 aaKnown RBP13.76□□□□□ -0.21
HDAC7-223ENST00000485796 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
HDAC7-223ENST00000485796 RNASELQ05823 741 aaKnown RBP13.76□□□□□ -0.21
HDAC7-223ENST00000485796 GRIK3Q13003 919 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 NCAPHQ15003 741 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 FOXR2Q6PJQ5 311 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 CREBRFQ8IUR6 639 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 LRRC43Q8N309 656 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 AOPEPQ8N6M6 819 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 ENOX1Q8TC92 643 aaKnown RBP13.76□□□□□ -0.21
HDAC7-223ENST00000485796 PARD3BQ8TEW8 1205 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 CEP63Q96MT8 703 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 HSD3B7Q9H2F3 369 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 KIAA1586Q9HCI6 787 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 SAMSN1Q9NSI8 373 aaKnown RBP13.76□□□□□ -0.21
HDAC7-223ENST00000485796 RNF216Q9NWF9 866 aaPredicted RBP13.76□□□□□ -0.21
HDAC7-223ENST00000485796 MSRAQ9UJ68 235 aa13.76□□□□□ -0.21
HDAC7-223ENST00000485796 PRG3Q9Y2Y8 225 aaPredicted RBP13.76□□□□□ -0.21
HDAC7-223ENST00000485796 TDRD15B5MCY1 1934 aaKnown RBP13.76□□□□□ -0.21
HDAC7-223ENST00000485796 SMTNL1A8MU46 457 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 BECN2A8MW95 431 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 ZC3H11AO75152 810 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC7-223ENST00000485796 IL18RAPO95256 599 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 ITGB1P05556 798 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 EPB41P11171 864 aaKnown RBP13.75□□□□□ -0.21
HDAC7-223ENST00000485796 BCAR1P56945 870 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 TFAMQ00059 246 aaKnown RBP13.75□□□□□ -0.21
HDAC7-223ENST00000485796 POU5F1Q01860 360 aaKnown RBP13.75□□□□□ -0.21
HDAC7-223ENST00000485796 MYL5Q02045 173 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 HSP90AA2PQ14568 343 aaPredicted RBP13.75□□□□□ -0.21
HDAC7-223ENST00000485796 TMEM132DQ14C87 1099 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 RAB30Q15771 203 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 CCDC40Q4G0X9 1142 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 SPOUT1Q5T280 376 aaKnown RBP13.75□□□□□ -0.21
HDAC7-223ENST00000485796 FILIP1Q7Z7B0 1213 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 DHX40Q8IX18 779 aaKnown RBP13.75□□□□□ -0.21
HDAC7-223ENST00000485796 COLGALT1Q8NBJ5 622 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 C3orf58Q8NDZ4 430 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 CXorf38Q8TB03 319 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 CLP1Q92989 425 aaKnown RBP13.75□□□□□ -0.21
HDAC7-223ENST00000485796 ELMO3Q96BJ8 720 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 TIFAQ96CG3 184 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 BPIFA3Q9BQP9 254 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 MTMR12Q9C0I1 747 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 ASB7Q9H672 318 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 CBX8Q9HC52 389 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 INTS13Q9NVM9 706 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 MARCH5Q9NX47 278 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 KANSL3Q9P2N6 904 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 NFE2L3Q9Y4A8 694 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 PDCD11Q14690 1871 aaKnown RBP13.75□□□□□ -0.21
HDAC7-223ENST00000485796 CHD7Q9P2D1 2997 aa13.75□□□□□ -0.21
HDAC7-223ENST00000485796 RALGAPA2Q2PPJ7 1873 aa13.74□□□□□ -0.21
HDAC7-223ENST00000485796 SZT2Q5T011 3432 aa13.74□□□□□ -0.21
HDAC7-223ENST00000485796 RFXAPO00287 272 aa13.74□□□□□ -0.21
HDAC7-223ENST00000485796 NRP1O14786 923 aa13.74□□□□□ -0.21
HDAC7-223ENST00000485796 SLC16A3O15427 465 aaKnown RBP13.74□□□□□ -0.21
HDAC7-223ENST00000485796 LRRN2O75325 713 aa13.74□□□□□ -0.21
HDAC7-223ENST00000485796 CAVIN2O95810 425 aa13.74□□□□□ -0.21
HDAC7-223ENST00000485796 OR1G1P47890 313 aa13.74□□□□□ -0.21
HDAC7-223ENST00000485796 CLCNKBP51801 687 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms