RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 HSPBP1Q9NZL4 362 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 LMCD1Q9NZU5 365 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 CPSF3Q9UKF6 684 aaKnown RBP8.98□□□□□ -0.97
SF3A1-208ENST00000485618 MAN1B1Q9UKM7 699 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 TRAF3IP3Q9Y228 551 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 USP20Q9Y2K6 914 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 C2CD2Q9Y426 696 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 MRPL42Q9Y6G3 142 aaKnown RBP8.98□□□□□ -0.97
SF3A1-208ENST00000485618 XIRP2A4UGR9 3374 aa8.98□□□□□ -0.97
SF3A1-208ENST00000485618 PRRC2BQ5JSZ5 2229 aaKnown RBP8.97□□□□□ -0.97
SF3A1-208ENST00000485618 SIP14410 1827 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 C5orf67F2Z3F1 127 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 BIN1O00499 593 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 ZC3H11AO75152 810 aaKnown RBP eCLIP8.97□□□□□ -0.97
SF3A1-208ENST00000485618 GNA14O95837 355 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 TNNC2P02585 160 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 NR3C1P04150 777 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 PRKCSHP14314 528 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-208ENST00000485618 CYP3A5P20815 502 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 ADSSP30520 456 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 PSMC2P35998 433 aaKnown RBP8.97□□□□□ -0.97
SF3A1-208ENST00000485618 PRCPP42785 496 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 OR1G1P47890 313 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 ACOT2P49753 483 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 SCNN1GP51170 649 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 CYP2J2P51589 502 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 BCAR1P56945 870 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 ENPEPQ07075 957 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 KCNA1Q09470 495 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 ADAM9Q13443 819 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 GPM6BQ13491 265 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 MORC3Q14149 939 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 TMEM132DQ14C87 1099 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 SNRNP35Q16560 246 aaKnown RBP8.97□□□□□ -0.97
SF3A1-208ENST00000485618 TPD52L1Q16890 204 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-208ENST00000485618 DUOXA2Q1HG44 320 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 XKR4Q5GH76 650 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 TMEM31Q5JXX7 168 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 PDXDC1Q6P996 788 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 DCLRE1AQ6PJP8 1040 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 ALKAL1Q6UXT8 129 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 ADSSL1Q8N142 457 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 COLGALT1Q8NBJ5 622 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 KIF12Q96FN5 646 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 ZFP42Q96MM3 310 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 CBWD1Q9BRT8 395 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 LRFN3Q9BTN0 628 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 PCIF1Q9H4Z3 704 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 RC3H2Q9HBD1 1191 aaKnown RBP8.97□□□□□ -0.97
SF3A1-208ENST00000485618 ANO10Q9NW15 660 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 CNTN3Q9P232 1028 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 UBQLN1Q9UMX0 589 aaKnown RBP8.97□□□□□ -0.97
SF3A1-208ENST00000485618 MAPK8IP1Q9UQF2 711 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 LZTS1Q9Y250 596 aa8.97□□□□□ -0.97
SF3A1-208ENST00000485618 TTC26A0AVF1 554 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 FAM86C2PA6NEL3 165 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 LACTBL1A8MY62 500 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 H3BNC9 293 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 ABLIM1O14639 778 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 CLIC2O15247 247 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 MAPK13O15264 365 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 TGFB1I1O43294 461 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 NCK2O43639 380 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 EDN1P05305 212 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 GALTP07902 379 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 CXCL8P10145 99 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 EPB41P11171 864 aaKnown RBP8.96□□□□□ -0.98
SF3A1-208ENST00000485618 NR2F2P24468 414 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 CCNE1P24864 410 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 ERCC5P28715 1186 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-208ENST00000485618 PNPLA4P41247 253 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 NLRP12P59046 1061 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 PLCB3Q01970 1234 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 CREMQ03060 361 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 PAK1Q13153 545 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 ENOX2Q16206 610 aaKnown RBP8.96□□□□□ -0.98
SF3A1-208ENST00000485618 KLHL40Q2TBA0 621 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 SLC10A6Q3KNW5 377 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 CEP135Q66GS9 1140 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 CENPPQ6IPU0 288 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 KLHL10Q6JEL2 608 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 KIAA1841Q6NSI8 718 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 SLC39A4Q6P5W5 647 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 ELMSAN1Q6PJG2 1045 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 INTS8Q75QN2 995 aaKnown RBP8.96□□□□□ -0.98
SF3A1-208ENST00000485618 BRSK2Q8IWQ3 736 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 GLIS3Q8NEA6 775 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 GPT2Q8TD30 523 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 MICAL1Q8TDZ2 1067 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 ANKRD36BP1Q96IX9 119 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 FBXL18Q96ME1 805 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 CEP63Q96MT8 703 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 MKNK1Q9BUB5 465 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 DNAI2Q9GZS0 605 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 KCTD10Q9H3F6 313 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 CWH43Q9H720 699 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 NRDE2Q9H7Z3 1164 aa8.96□□□□□ -0.98
SF3A1-208ENST00000485618 UBE2ZQ9H832 354 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-208ENST00000485618 METTL14Q9HCE5 456 aaKnown RBP8.96□□□□□ -0.98
SF3A1-208ENST00000485618 NGRNQ9NPE2 291 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms