RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 PLIN2Q99541 437 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 NTPCRQ9BSD7 190 aaKnown RBP28.17■■■□□ 2.1
HLA-F-227ENST00000485513 FAM86C1Q9NVL1 165 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 DOCK6Q96HP0 2047 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 CITO14578 2027 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 TRAPPC3O43617 180 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 NARSO43776 548 aaKnown RBP28.16■■■□□ 2.1
HLA-F-227ENST00000485513 C8AP07357 584 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 PROZP22891 400 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 ARL6IP4Q66PJ3 421 aaKnown RBP28.16■■■□□ 2.1
HLA-F-227ENST00000485513 MPZL3Q6UWV2 235 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 CD300LGQ6UXG3 332 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 SPIRE2Q8WWL2 714 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 ATOH1Q92858 354 aaPredicted RBP28.16■■■□□ 2.1
HLA-F-227ENST00000485513 ACAP3Q96P50 834 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 SLC38A7Q9NVC3 462 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 MTRRQ9UBK8 725 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 KCNG1Q9UIX4 513 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 SMC3Q9UQE7 1217 aa28.16■■■□□ 2.1
HLA-F-227ENST00000485513 H0Y858 1186 aa28.15■■■□□ 2.1
HLA-F-227ENST00000485513 ABLIM1O14639 778 aa28.15■■■□□ 2.1
HLA-F-227ENST00000485513 LAMP2P13473 410 aa28.15■■■□□ 2.1
HLA-F-227ENST00000485513 PLS3P13797 630 aa28.15■■■□□ 2.1
HLA-F-227ENST00000485513 OR1D2P34982 312 aa28.15■■■□□ 2.1
HLA-F-227ENST00000485513 SMTNP53814 917 aa28.15■■■□□ 2.1
HLA-F-227ENST00000485513 SOX4Q06945 474 aaPredicted RBP28.15■■■□□ 2.1
HLA-F-227ENST00000485513 STRN3Q13033 797 aa28.15■■■□□ 2.1
HLA-F-227ENST00000485513 RAB33AQ14088 237 aa28.15■■■□□ 2.1
HLA-F-227ENST00000485513 GRASPQ7Z6J2 395 aaPredicted RBP28.15■■■□□ 2.1
HLA-F-227ENST00000485513 SLC44A3Q8N4M1 653 aa28.15■■■□□ 2.1
HLA-F-227ENST00000485513 C3orf58Q8NDZ4 430 aa28.15■■■□□ 2.1
HLA-F-227ENST00000485513 DDX27Q96GQ7 796 aaKnown RBP28.15■■■□□ 2.1
HLA-F-227ENST00000485513 SNX27Q96L92 541 aa28.15■■■□□ 2.1
HLA-F-227ENST00000485513 PLA2G4BP0C869 781 aa28.14■■■□□ 2.1
HLA-F-227ENST00000485513 HARSP12081 509 aaKnown RBP28.14■■■□□ 2.1
HLA-F-227ENST00000485513 FSHRP23945 695 aa28.14■■■□□ 2.1
HLA-F-227ENST00000485513 TKTP29401 623 aaKnown RBP28.14■■■□□ 2.1
HLA-F-227ENST00000485513 HOXA9P31269 272 aa28.14■■■□□ 2.1
HLA-F-227ENST00000485513 SLC12A3P55017 1021 aa28.14■■■□□ 2.1
HLA-F-227ENST00000485513 CWF19L1Q69YN2 538 aaKnown RBP28.14■■■□□ 2.1
HLA-F-227ENST00000485513 SIX5Q8N196 739 aa28.14■■■□□ 2.1
HLA-F-227ENST00000485513 TMEM161BQ8NDZ6 487 aa28.14■■■□□ 2.1
HLA-F-227ENST00000485513 ZMAT2Q96NC0 199 aaKnown RBP28.14■■■□□ 2.1
HLA-F-227ENST00000485513 KCND2Q9NZV8 630 aa28.14■■■□□ 2.1
HLA-F-227ENST00000485513 I3L4J1 428 aa28.13■■■□□ 2.09
HLA-F-227ENST00000485513 KCNE1P15382 129 aa28.13■■■□□ 2.09
HLA-F-227ENST00000485513 NPR3P17342 541 aa28.13■■■□□ 2.09
HLA-F-227ENST00000485513 BRCC3P46736 316 aa28.13■■■□□ 2.09
HLA-F-227ENST00000485513 TMEM119Q4V9L6 283 aa28.13■■■□□ 2.09
HLA-F-227ENST00000485513 AXDND1Q5T1B0 1012 aaPredicted RBP28.13■■■□□ 2.09
HLA-F-227ENST00000485513 ANKS3Q6ZW76 656 aa28.13■■■□□ 2.09
HLA-F-227ENST00000485513 SLC7A14Q8TBB6 771 aa28.13■■■□□ 2.09
HLA-F-227ENST00000485513 ZBTB45Q96K62 511 aaPredicted RBP28.13■■■□□ 2.09
HLA-F-227ENST00000485513 POLIQ9UNA4 740 aa28.13■■■□□ 2.09
HLA-F-227ENST00000485513 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.13■■■□□ 2.09
HLA-F-227ENST00000485513 BACE2Q9Y5Z0 518 aa28.13■■■□□ 2.09
HLA-F-227ENST00000485513 CDY1Q9Y6F8 540 aa28.13■■■□□ 2.09
HLA-F-227ENST00000485513 PODXLO00592 558 aa28.12■■■□□ 2.09
HLA-F-227ENST00000485513 CCL16O15467 120 aa28.12■■■□□ 2.09
HLA-F-227ENST00000485513 XYLBO75191 536 aa28.12■■■□□ 2.09
HLA-F-227ENST00000485513 TOM1L1O75674 476 aa28.12■■■□□ 2.09
HLA-F-227ENST00000485513 CFHP08603 1231 aa28.12■■■□□ 2.09
HLA-F-227ENST00000485513 NTHL1P78549 312 aa28.12■■■□□ 2.09
HLA-F-227ENST00000485513 LARP1BQ659C4 914 aaKnown RBP28.12■■■□□ 2.09
HLA-F-227ENST00000485513 RSPO2Q6UXX9 243 aaPredicted RBP28.12■■■□□ 2.09
HLA-F-227ENST00000485513 CNTN3Q9P232 1028 aa28.12■■■□□ 2.09
HLA-F-227ENST00000485513 ANKFY1Q9P2R3 1169 aa28.12■■■□□ 2.09
HLA-F-227ENST00000485513 WNT16Q9UBV4 365 aa28.12■■■□□ 2.09
HLA-F-227ENST00000485513 ZFP37Q9Y6Q3 630 aaPredicted RBP28.12■■■□□ 2.09
HLA-F-227ENST00000485513 MAPTP10636 758 aaKnown RBP28.11■■■□□ 2.09
HLA-F-227ENST00000485513 SRFP11831 508 aa28.11■■■□□ 2.09
HLA-F-227ENST00000485513 AOC1P19801 751 aa28.11■■■□□ 2.09
HLA-F-227ENST00000485513 HTR4Q13639 388 aa28.11■■■□□ 2.09
HLA-F-227ENST00000485513 NOLC1Q14978 699 aaKnown RBP eCLIP28.11■■■□□ 2.09
HLA-F-227ENST00000485513 UVSSAQ2YD98 709 aa28.11■■■□□ 2.09
HLA-F-227ENST00000485513 AK8Q96MA6 479 aa28.11■■■□□ 2.09
HLA-F-227ENST00000485513 NPHP3-ACAD11A0A0J9YXS1 232 aa28.1■■■□□ 2.09
HLA-F-227ENST00000485513 ANHXE9PGG2 379 aa28.1■■■□□ 2.09
HLA-F-227ENST00000485513 ZPBP2Q6X784 338 aa28.1■■■□□ 2.09
HLA-F-227ENST00000485513 C18orf25Q96B23 403 aaPredicted RBP28.1■■■□□ 2.09
HLA-F-227ENST00000485513 TBC1D32Q96NH3 1257 aa28.1■■■□□ 2.09
HLA-F-227ENST00000485513 LARSQ9P2J5 1176 aaKnown RBP28.1■■■□□ 2.09
HLA-F-227ENST00000485513 CDH7Q9ULB5 785 aa28.1■■■□□ 2.09
HLA-F-227ENST00000485513 SLC26A4O43511 780 aa28.09■■■□□ 2.09
HLA-F-227ENST00000485513 PI15O43692 258 aa28.09■■■□□ 2.09
HLA-F-227ENST00000485513 POU2F2P09086 479 aa28.09■■■□□ 2.09
HLA-F-227ENST00000485513 RPL9P32969 192 aaKnown RBP28.09■■■□□ 2.09
HLA-F-227ENST00000485513 CACNB1Q02641 598 aaPredicted RBP28.09■■■□□ 2.09
HLA-F-227ENST00000485513 ARSHQ5FYA8 562 aa28.09■■■□□ 2.09
HLA-F-227ENST00000485513 RTL10Q7L3V2 364 aa28.09■■■□□ 2.09
HLA-F-227ENST00000485513 RTP3Q9BQQ7 232 aa28.09■■■□□ 2.09
HLA-F-227ENST00000485513 NUB1Q9Y5A7 615 aa28.09■■■□□ 2.09
HLA-F-227ENST00000485513 NUMBLQ9Y6R0 609 aa28.09■■■□□ 2.09
HLA-F-227ENST00000485513 KRBA1A5PL33 1030 aa28.08■■■□□ 2.09
HLA-F-227ENST00000485513 H0YCG3 227 aa28.08■■■□□ 2.09
HLA-F-227ENST00000485513 CLDN3O15551 220 aa28.08■■■□□ 2.09
HLA-F-227ENST00000485513 MEFVO15553 781 aaPredicted RBP28.08■■■□□ 2.09
HLA-F-227ENST00000485513 UBA7P41226 1012 aa28.08■■■□□ 2.09
HLA-F-227ENST00000485513 SEZ6Q53EL9 994 aa28.08■■■□□ 2.09
HLA-F-227ENST00000485513 VARS2Q5ST30 1063 aaKnown RBP28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms