RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TRAPPC3O43617 180 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 KINO60870 393 aaKnown RBP14.34□□□□□ -0.11
HDAC6-227ENST00000485102 DTNBO60941 627 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 ECI2O75521 394 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 B3GAT3O94766 335 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 RPS9P46781 194 aaKnown RBP14.34□□□□□ -0.11
HDAC6-227ENST00000485102 UPP1Q16831 310 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 PABPC1LQ4VXU2 614 aaKnown RBP14.34□□□□□ -0.11
HDAC6-227ENST00000485102 XKR4Q5GH76 650 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 EEF1DP3Q658K8 133 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 SLC8B1Q6J4K2 584 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 PADI6Q6TGC4 694 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 MAMSTRQ6ZN01 415 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 ANKS3Q6ZW76 656 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 NECAB1Q8N987 351 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 PCDHGA2Q9Y5H1 932 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 SPTBN2O15020 2390 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 ARHGEF37A1IGU5 675 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 FAM170BA6NMN3 283 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 LRRN2O75325 713 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 MICAL2O94851 1124 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 ABLIM3O94929 683 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 EDN1P05305 212 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 TRIM29Q14134 588 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 ALKAL1Q6UXT8 129 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 APBB1IPQ7Z5R6 666 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-227ENST00000485102 KIAA2013Q8IYS2 634 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 GPR161Q8N6U8 529 aaKnown RBP14.33□□□□□ -0.12
HDAC6-227ENST00000485102 ZBTB44Q8NCP5 570 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 ZNF461Q8TAF7 563 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 ERMNQ8TAM6 284 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 DEPTORQ8TB45 409 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 KIFAP3Q92845 792 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 LTB4R2Q9NPC1 389 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 POLIQ9UNA4 740 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 CDY1Q9Y6F8 540 aa14.33□□□□□ -0.12
HDAC6-227ENST00000485102 PATJQ8NI35 1801 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 ARHGEF35A5YM69 484 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 NCAM2O15394 837 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 LAMTOR5O43504 91 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 TBC1D4O60343 1298 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 MCM7P33993 719 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 CLCNKBP51801 687 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 TMEM132AQ24JP5 1023 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 ZBTB41Q5SVQ8 909 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 NT5DC1Q5TFE4 455 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 DGLUCYQ7Z3D6 616 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 ST13P5Q8NFI4 369 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-227ENST00000485102 DDX27Q96GQ7 796 aaKnown RBP14.32□□□□□ -0.12
HDAC6-227ENST00000485102 IFT74Q96LB3 600 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 PTPRHQ9HD43 1115 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 HCFC1R1Q9NWW0 138 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 TNFSF13BQ9Y275 285 aa14.32□□□□□ -0.12
HDAC6-227ENST00000485102 MRPS23Q9Y3D9 190 aaKnown RBP14.32□□□□□ -0.12
HDAC6-227ENST00000485102 MTF2Q9Y483 593 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-227ENST00000485102 CACNA1BQ00975 2339 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 SMIM28A0A1B0GU29 152 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 LILRB5O75023 590 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 LARGE1O95461 756 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 RHOP08100 348 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 PTPN2P17706 415 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 IGFBP6P24592 240 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-227ENST00000485102 GRM5P41594 1212 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 FZD5Q13467 585 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 SAFBQ15424 915 aaKnown RBP eCLIP14.31□□□□□ -0.12
HDAC6-227ENST00000485102 VARS2Q5ST30 1063 aaKnown RBP14.31□□□□□ -0.12
HDAC6-227ENST00000485102 ATF7IP2Q5U623 682 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 HAUS3Q68CZ6 603 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 TCEAL8Q8IYN2 117 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 DNASE1L2Q92874 299 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 ELSPBP1Q96BH3 223 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 FAM126AQ9BYI3 521 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-227ENST00000485102 TRPV5Q9NQA5 729 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 SPATA6Q9NWH7 488 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-227ENST00000485102 ZSCAN32Q9NX65 697 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 USP20Q9Y2K6 914 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 MRPS17Q9Y2R5 130 aaKnown RBP14.31□□□□□ -0.12
HDAC6-227ENST00000485102 GDAQ9Y2T3 454 aa14.31□□□□□ -0.12
HDAC6-227ENST00000485102 SHISA7A6NL88 538 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 K7ERI5 159 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 SYN3O14994 580 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 JAK2O60674 1132 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 OR52Z1P0C646 297 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 ATF2P15336 505 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 SDHBP21912 280 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 TARSP26639 723 aaKnown RBP14.3□□□□□ -0.12
HDAC6-227ENST00000485102 TKTP29401 623 aaKnown RBP14.3□□□□□ -0.12
HDAC6-227ENST00000485102 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
HDAC6-227ENST00000485102 MRPL58Q14197 206 aaKnown RBP14.3□□□□□ -0.12
HDAC6-227ENST00000485102 PDIA5Q14554 519 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 UBXN2BQ14CS0 331 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 SLC5A9Q2M3M2 681 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 POTEHQ6S545 545 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 ZNF852Q6ZMS4 543 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 DCLK2Q8N568 766 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 C3orf58Q8NDZ4 430 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 ATRIPQ8WXE1 791 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 KXD1Q9BQD3 176 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 IER2Q9BTL4 223 aa14.3□□□□□ -0.12
HDAC6-227ENST00000485102 EPC1Q9H2F5 836 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms