RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 SEZ6Q53EL9 994 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 GLRA4Q5JXX5 417 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 ZBTB41Q5SVQ8 909 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 DCLRE1AQ6PJP8 1040 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 CRELD2Q6UXH1 353 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-213ENST00000485080 TMC7Q7Z402 723 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 TMEM174Q8WUU8 243 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 PPM1EQ8WY54 764 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 PABPC5Q96DU9 382 aaKnown RBP19.36■□□□□ 0.69
SREBF1-213ENST00000485080 ASB7Q9H672 318 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 ADAM28Q9UKQ2 775 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 DERAQ9Y315 318 aa19.36■□□□□ 0.69
SREBF1-213ENST00000485080 PDCD11Q14690 1871 aaKnown RBP19.35■□□□□ 0.69
SREBF1-213ENST00000485080 CASTOR2A6NHX0 329 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 LILRB3O75022 631 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 CYP3A5P20815 502 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 PPP2R3AQ06190 1150 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 HYAL1Q12794 435 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 STK4Q13043 487 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 KIAA0895Q8NCT3 520 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 MICAL1Q8TDZ2 1067 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 CCDC47Q96A33 483 aaKnown RBP19.35■□□□□ 0.69
SREBF1-213ENST00000485080 PAAF1Q9BRP4 392 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 HERC2P3Q9BVR0 1158 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 SLC39A2Q9NP94 309 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 ENTPD7Q9NQZ7 604 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 CHST7Q9NS84 486 aa19.35■□□□□ 0.69
SREBF1-213ENST00000485080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-213ENST00000485080 C2orf71A6NGG8 1288 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 LACTBL1A8MY62 500 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 TGFB1I1O43294 461 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 EXTL3O43909 919 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 PRR29P0C7W0 189 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 UBE2HP62256 183 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 SOX4Q06945 474 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-213ENST00000485080 FUT10Q6P4F1 479 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 C12orf56Q8IXR9 622 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 EFHBQ8N7U6 833 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 SPATA20Q8TB22 786 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 GOLGA5Q8TBA6 731 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 HLA-CQ95604 372 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 FBXL18Q96ME1 805 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 CBWD1Q9BRT8 395 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 HOOK1Q9UJC3 728 aaKnown RBP19.34■□□□□ 0.69
SREBF1-213ENST00000485080 SSX2IPQ9Y2D8 614 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 C2CD2Q9Y426 696 aa19.34■□□□□ 0.69
SREBF1-213ENST00000485080 SF3B1O75533 1304 aaKnown RBP eCLIP19.33■□□□□ 0.692e-6■■■■■ 107.9
SREBF1-213ENST00000485080 HIDE1A8MVS5 230 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 F8W810 466 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 XPOTO43592 962 aaKnown RBP19.33■□□□□ 0.68
SREBF1-213ENST00000485080 GADD45BO75293 160 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-213ENST00000485080 TADA2AO75478 443 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 IL18RAPO95256 599 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 CXCL14O95715 111 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 LRPAP1P30533 357 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 ACOT2P49753 483 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 DSG1Q02413 1049 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 ELAVL2Q12926 359 aaKnown RBP19.33■□□□□ 0.68
SREBF1-213ENST00000485080 PTPN14Q15678 1187 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 DUSP6Q16828 381 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 KNOP1Q1ED39 458 aaKnown RBP19.33■□□□□ 0.68
SREBF1-213ENST00000485080 PLPP4Q5VZY2 271 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 CD300LGQ6UXG3 332 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 HS2ST1Q7LGA3 356 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 ADGRD2Q7Z7M1 963 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 NT5DC4Q86YG4 428 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 ATXN2LQ8WWM7 1075 aaKnown RBP19.33■□□□□ 0.68
SREBF1-213ENST00000485080 TLE6Q9H808 572 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 KIAA1586Q9HCI6 787 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 AGPAT3Q9NRZ7 376 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 THEGQ9P2T0 379 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 UBQLN1Q9UMX0 589 aaKnown RBP19.33■□□□□ 0.68
SREBF1-213ENST00000485080 PCDHGC5Q9Y5F6 944 aa19.33■□□□□ 0.68
SREBF1-213ENST00000485080 KIF4AO95239 1232 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 C1RP00736 705 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 CLCNKBP51801 687 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 ADAM15Q13444 863 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 KCNC3Q14003 757 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 SKIV2LQ15477 1246 aaKnown RBP19.32■□□□□ 0.68
SREBF1-213ENST00000485080 USP41Q3LFD5 358 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 TPRNQ4KMQ1 711 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 KIAA0319Q5VV43 1072 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 SPATA1Q5VX52 437 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 ARMCX5Q6P1M9 558 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 TMEM184AQ6ZMB5 413 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 BRSK2Q8IWQ3 736 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 C18orf25Q96B23 403 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-213ENST00000485080 GSDMAQ96QA5 445 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 GPR62Q9BZJ7 368 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 UBE2ZQ9H832 354 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-213ENST00000485080 RXFP1Q9HBX9 757 aa19.32■□□□□ 0.68
SREBF1-213ENST00000485080 CUL9Q8IWT3 2517 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 KINO60870 393 aaKnown RBP19.31■□□□□ 0.68
SREBF1-213ENST00000485080 B3GAT3O94766 335 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 KIF20AO95235 890 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 PAX3P23760 479 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 NRIP1P48552 1158 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 TAS1R1Q7RTX1 841 aa19.31■□□□□ 0.68
SREBF1-213ENST00000485080 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.31■□□□□ 0.68
SREBF1-213ENST00000485080 GPD1LQ8N335 351 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms