RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-215	ENST00000484555	SNTG2	Q9NY99	539 aa		13.75	□□□□□ -0.21
PABPC4-215	ENST00000484555	ARHGEF37	A1IGU5	675 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	SLC30A4	O14863	429 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	N4BP3	O15049	544 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	RECQL4	O94761	1208 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	RET	P07949	1114 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	PTPN2	P17706	415 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	PPP2R5D	Q14738	602 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	SLC5A9	Q2M3M2	681 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	CD300LG	Q6UXG3	332 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	PIK3AP1	Q6ZUJ8	805 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	ANKS3	Q6ZW76	656 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	NETO1	Q8TDF5	533 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	ING5	Q8WYH8	240 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	CXCL16	Q9H2A7	254 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	PDZD7	Q9H5P4	517 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	PCDHA12	Q9UN75	941 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	CDY1	Q9Y6F8	540 aa		13.74	□□□□□ -0.21
PABPC4-215	ENST00000484555	TPR	P12270	2363 aa	Known RBP	13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	LRRIQ4	A6NIV6	560 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	TTLL13P	A6NNM8	815 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	XBP1	P17861	261 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	FCAR	P24071	287 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	CCR3	P51677	355 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	SPEM2	Q0P670	501 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	ST3GAL2	Q16842	350 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	PRSS36	Q5K4E3	855 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	SKAP1	Q86WV1	359 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	MAP4K3	Q8IVH8	894 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	ZBTB8OS	Q8IWT0	167 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	ZNF461	Q8TAF7	563 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	OXER1	Q8TDS5	423 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	UROC1	Q96N76	676 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	RAB23	Q9ULC3	237 aa		13.73	□□□□□ -0.21
PABPC4-215	ENST00000484555	ACACB	O00763	2458 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	STK36	Q9NRP7	1315 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	ACKR2	O00590	384 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	EPB41L2	O43491	1005 aa	Known RBP	13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	TRAPPC3	O43617	180 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	B3GAT3	O94766	335 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	ABLIM3	O94929	683 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	CEBPB	P17676	345 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	MLLT6	P55198	1093 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	UPP1	Q16831	310 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	EARS2	Q5JPH6	523 aa	Known RBP	13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	SLC8B1	Q6J4K2	584 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	MCPH1	Q8NEM0	835 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	PIGO	Q8TEQ8	1089 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	IRF7	Q92985	503 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	DDX27	Q96GQ7	796 aa	Known RBP	13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	PPP1R10	Q96QC0	940 aa	Known RBP	13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	ADPGK	Q9BRR6	497 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	TRMT61B	Q9BVS5	477 aa	Known RBP	13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	TM6SF1	Q9BZW5	370 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	C2orf40	Q9H1Z8	148 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	BRD9	Q9H8M2	597 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	ZFP14	Q9HCL3	533 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	CYP46A1	Q9Y6A2	500 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	COL4A2	P08572	1712 aa		13.72	□□□□□ -0.21
PABPC4-215	ENST00000484555	ZNF197	O14709	1029 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	FOXD2	O60548	495 aa	Predicted RBP	13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	USO1	O60763	962 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	CDKL5	O76039	1030 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	ATF2	P15336	505 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	IGFBP6	P24592	240 aa	Predicted RBP	13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	CLCNKB	P51801	687 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	PRPF4B	Q13523	1007 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	CSRP2	Q16527	193 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	MAPK6	Q16659	721 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	PPM1J	Q5JR12	505 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	FAM78A	Q5JUQ0	283 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	NOSTRIN	Q8IVI9	506 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	FAM3C	Q92520	227 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	TNFRSF25	Q93038	417 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	CCDC43	Q96MW1	224 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	ASB16	Q96NS5	453 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	CCDC113	Q9H0I3	377 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	TTC12	Q9H892	705 aa	Predicted RBP	13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	LMAN1L	Q9HAT1	526 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	GPRC5C	Q9NQ84	441 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	NDRG2	Q9UN36	371 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	CFAP47	Q6ZTR5	3102 aa		13.71	□□□□□ -0.21
PABPC4-215	ENST00000484555	REC8	O95072	547 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	PAPSS2	O95340	614 aa	Predicted RBP	13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	LRG1	P02750	347 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	PRKCB	P05771	671 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	CHRNB1	P11230	501 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	PSMC3	P17980	439 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	TKT	P29401	623 aa	Known RBP	13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	CNR2	P34972	360 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	ROR1	Q01973	937 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	STK3	Q13188	491 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	CALCRL	Q16602	461 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	DCAF4L1	Q3SXM0	396 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	TCEAL8	Q8IYN2	117 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	DEPDC1B	Q8WUY9	529 aa		13.7	□□□□□ -0.22
PABPC4-215	ENST00000484555	MTMR9	Q96QG7	549 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms