RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PIGRP01833 764 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 ADH1AP07327 375 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 SPATA31D3P0C874 917 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 MYBP10242 640 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 KCNE1P15382 129 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 SCP2P22307 547 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 TNFSF9P41273 254 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 CES5AQ6NT32 575 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 SLC39A4Q6P5W5 647 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 DCLRE1AQ6PJP8 1040 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 SHC4Q6S5L8 630 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 TMC5Q6UXY8 1006 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 SPATA31D4Q6ZUB0 917 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 ZNF720Q7Z2F6 126 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 CEP57Q86XR8 500 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 PALB2Q86YC2 1186 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 RNF135Q8IUD6 432 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 GPR65Q8IYL9 337 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 C3orf58Q8NDZ4 430 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 C18orf25Q96B23 403 aaPredicted RBP14.09□□□□□ -0.15
HDAC1-209ENST00000484305 UROC1Q96N76 676 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 TTPALQ9BTX7 342 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 C1QTNF1Q9BXJ1 281 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 POMKQ9H5K3 350 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 FNIP2Q9P278 1114 aa14.09□□□□□ -0.15
HDAC1-209ENST00000484305 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 ANKRD63C9JTQ0 380 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 TMEM189-UBE2V1I3L0A0 370 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 FAM189A1O60320 539 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 CUTAO60888 179 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 GLUD1P00367 558 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 CLTAP09496 248 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 CXCL8P10145 99 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 SP100P23497 879 aaPredicted RBP14.08□□□□□ -0.16
HDAC1-209ENST00000484305 ELAVL2Q12926 359 aaKnown RBP14.08□□□□□ -0.16
HDAC1-209ENST00000484305 ZBTB41Q5SVQ8 909 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 AXDND1Q5T1B0 1012 aaPredicted RBP14.08□□□□□ -0.16
HDAC1-209ENST00000484305 MAP4K3Q8IVH8 894 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 TMEM130Q8N3G9 435 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 LNX1Q8TBB1 728 aaPredicted RBP14.08□□□□□ -0.16
HDAC1-209ENST00000484305 STAMQ92783 540 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 IKZF4Q9H2S9 585 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 ST6GALNAC4Q9H4F1 302 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 SFXN1Q9H9B4 322 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 C11orf16Q9NQ32 467 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 MAN1C1Q9NR34 630 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.08□□□□□ -0.16
HDAC1-209ENST00000484305 SLC38A7Q9NVC3 462 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 TBC1D7Q9P0N9 293 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 MYO10Q9HD67 2058 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 ANK1P16157 1881 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 DENND4AQ7Z401 1863 aa14.08□□□□□ -0.16
HDAC1-209ENST00000484305 A0A0B4J269 797 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 TTC26A0AVF1 554 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 TISP43B9A030 160 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 I3L4J1 428 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 PODXLO00592 558 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 TGM5O43548 720 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 DCXO43602 365 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 ALADP13716 330 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 FGFR3P22607 806 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 MTHFRP42898 656 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 BRCC3P46736 316 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 DNM1Q05193 864 aaKnown RBP14.07□□□□□ -0.16
HDAC1-209ENST00000484305 SPAG1Q07617 926 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 E2F4Q16254 413 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 ATAT1Q5SQI0 421 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 PIK3R5Q8WYR1 880 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 DDX27Q96GQ7 796 aaKnown RBP14.07□□□□□ -0.16
HDAC1-209ENST00000484305 RIPOR3Q96MK2 946 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 NECTIN4Q96NY8 510 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 CLSTN3Q9BQT9 956 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 STRA6Q9BX79 667 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 PLEKHA5Q9HAU0 1116 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 SEL1LQ9UBV2 794 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 MUTYHQ9UIF7 546 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 PCDHA7Q9UN72 937 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 ZDHHC9Q9Y397 364 aa14.07□□□□□ -0.16
HDAC1-209ENST00000484305 TCHHQ07283 1943 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 FRMD3A2A2Y4 597 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 FAM86C2PA6NEL3 165 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 LACTBL1A8MY62 500 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 OGTO15294 1046 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 PPP1R37O75864 691 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 IDEP14735 1019 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 GAP43P17677 238 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 TKTP29401 623 aaKnown RBP14.06□□□□□ -0.16
HDAC1-209ENST00000484305 RPL9P32969 192 aaKnown RBP14.06□□□□□ -0.16
HDAC1-209ENST00000484305 ABCD1P33897 745 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 CREMQ03060 361 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 KCNA1Q09470 495 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 ENOX2Q16206 610 aaKnown RBP14.06□□□□□ -0.16
HDAC1-209ENST00000484305 PSMD5Q16401 504 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 KYAT1Q16773 422 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 HERC4Q5GLZ8 1057 aaPredicted RBP14.06□□□□□ -0.16
HDAC1-209ENST00000484305 ATL3Q6DD88 541 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 LILRA6Q6PI73 481 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.06□□□□□ -0.16
HDAC1-209ENST00000484305 GPR149Q86SP6 731 aa14.06□□□□□ -0.16
HDAC1-209ENST00000484305 KCNG4Q8TDN1 519 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms