RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 HOXD13P35453 343 aa29.02■■■□□ 2.24
SMDT1-203ENST00000484235 POU5F1Q01860 360 aaKnown RBP29.02■■■□□ 2.24
SMDT1-203ENST00000484235 KMT5BQ4FZB7 885 aa29.02■■■□□ 2.24
SMDT1-203ENST00000484235 ADGRD2Q7Z7M1 963 aa29.02■■■□□ 2.24
SMDT1-203ENST00000484235 RABGGTAQ92696 567 aa29.02■■■□□ 2.24
SMDT1-203ENST00000484235 TSPAN18Q96SJ8 248 aa29.02■■■□□ 2.24
SMDT1-203ENST00000484235 SLC39A2Q9NP94 309 aa29.02■■■□□ 2.24
SMDT1-203ENST00000484235 ADAM28Q9UKQ2 775 aa29.02■■■□□ 2.24
SMDT1-203ENST00000484235 MYO7AQ13402 2215 aa29.01■■■□□ 2.24
SMDT1-203ENST00000484235 UBE4BO95155 1302 aa29.01■■■□□ 2.23
SMDT1-203ENST00000484235 F8W810 466 aa29.01■■■□□ 2.23
SMDT1-203ENST00000484235 RPN1P04843 607 aaKnown RBP29.01■■■□□ 2.23
SMDT1-203ENST00000484235 ACOT2P49753 483 aa29.01■■■□□ 2.23
SMDT1-203ENST00000484235 PPP2R3AQ06190 1150 aa29.01■■■□□ 2.23
SMDT1-203ENST00000484235 DPYDQ12882 1025 aa29.01■■■□□ 2.23
SMDT1-203ENST00000484235 DCLRE1AQ6PJP8 1040 aa29.01■■■□□ 2.23
SMDT1-203ENST00000484235 RBM23Q86U06 439 aaKnown RBP29.01■■■□□ 2.23
SMDT1-203ENST00000484235 CD302Q8IX05 232 aa29.01■■■□□ 2.23
SMDT1-203ENST00000484235 SCFD1Q8WVM8 642 aa29.01■■■□□ 2.23
SMDT1-203ENST00000484235 PABPC5Q96DU9 382 aaKnown RBP29.01■■■□□ 2.23
SMDT1-203ENST00000484235 DDX27Q96GQ7 796 aaKnown RBP29.01■■■□□ 2.23
SMDT1-203ENST00000484235 IGFLR1Q9H665 355 aa29.01■■■□□ 2.23
SMDT1-203ENST00000484235 CACNG4Q9UBN1 327 aa29.01■■■□□ 2.23
SMDT1-203ENST00000484235 IRAK3Q9Y616 596 aa29.01■■■□□ 2.23
SMDT1-203ENST00000484235 TDRD15B5MCY1 1934 aaKnown RBP29■■■□□ 2.23
SMDT1-203ENST00000484235 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29■■■□□ 2.23
SMDT1-203ENST00000484235 C2orf71A6NGG8 1288 aa29■■■□□ 2.23
SMDT1-203ENST00000484235 HIDE1A8MVS5 230 aa29■■■□□ 2.23
SMDT1-203ENST00000484235 LACTBL1A8MY62 500 aa29■■■□□ 2.23
SMDT1-203ENST00000484235 SOD2P04179 222 aa29■■■□□ 2.23
SMDT1-203ENST00000484235 NRIP1P48552 1158 aa29■■■□□ 2.23
SMDT1-203ENST00000484235 UPP1Q16831 310 aa29■■■□□ 2.23
SMDT1-203ENST00000484235 TMEM87AQ8NBN3 555 aa29■■■□□ 2.23
SMDT1-203ENST00000484235 CCDC47Q96A33 483 aaKnown RBP29■■■□□ 2.23
SMDT1-203ENST00000484235 IPO9Q96P70 1041 aaKnown RBP29■■■□□ 2.23
SMDT1-203ENST00000484235 CDCA3Q99618 268 aaPredicted RBP29■■■□□ 2.23
SMDT1-203ENST00000484235 GTF3C5Q9Y5Q8 519 aaPredicted RBP29■■■□□ 2.23
SMDT1-203ENST00000484235 LDHAP00338 332 aaKnown RBP28.99■■■□□ 2.23
SMDT1-203ENST00000484235 PRR29P0C7W0 189 aa28.99■■■□□ 2.23
SMDT1-203ENST00000484235 RPL9P32969 192 aaKnown RBP28.99■■■□□ 2.23
SMDT1-203ENST00000484235 CLCNKBP51801 687 aa28.99■■■□□ 2.23
SMDT1-203ENST00000484235 SOX4Q06945 474 aaPredicted RBP28.99■■■□□ 2.23
SMDT1-203ENST00000484235 STK4Q13043 487 aa28.99■■■□□ 2.23
SMDT1-203ENST00000484235 BMT2Q1RMZ1 405 aa28.99■■■□□ 2.23
SMDT1-203ENST00000484235 CTC1Q2NKJ3 1217 aa28.99■■■□□ 2.23
SMDT1-203ENST00000484235 TAS1R1Q7RTX1 841 aa28.99■■■□□ 2.23
SMDT1-203ENST00000484235 RNF168Q8IYW5 571 aaPredicted RBP28.99■■■□□ 2.23
SMDT1-203ENST00000484235 TIGD1Q96MW7 591 aa28.99■■■□□ 2.23
SMDT1-203ENST00000484235 FSD2A1L4K1 749 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 PER2O15055 1255 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 GTF2F1P35269 517 aaKnown RBP eCLIP28.98■■■□□ 2.233e-17■■■□□ 15.1
SMDT1-203ENST00000484235 SNRPFP62306 86 aaKnown RBP28.98■■■□□ 2.23
SMDT1-203ENST00000484235 ADAM15Q13444 863 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 ZBTB6Q15916 424 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 DUSP6Q16828 381 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 FUT10Q6P4F1 479 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 CRELD2Q6UXH1 353 aaPredicted RBP28.98■■■□□ 2.23
SMDT1-203ENST00000484235 EFHBQ8N7U6 833 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 C18orf25Q96B23 403 aaPredicted RBP28.98■■■□□ 2.23
SMDT1-203ENST00000484235 CBWD1Q9BRT8 395 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 GPR62Q9BZJ7 368 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 UBE2ZQ9H832 354 aaPredicted RBP28.98■■■□□ 2.23
SMDT1-203ENST00000484235 GOLGA2P5Q9HBQ8 144 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 TSHZ2Q9NRE2 1034 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 SSX2IPQ9Y2D8 614 aa28.98■■■□□ 2.23
SMDT1-203ENST00000484235 TMEM189-UBE2V1I3L0A0 370 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 KIAA0391O15091 583 aaKnown RBP28.97■■■□□ 2.23
SMDT1-203ENST00000484235 B3GAT3O94766 335 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 KIF4AO95239 1232 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 ARMCX5Q6P1M9 558 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 AUTS2Q8WXX7 1259 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 FAM212AQ96EL1 285 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 KIF12Q96FN5 646 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 FAM213AQ9BRX8 229 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 HERC2P3Q9BVR0 1158 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 ASB7Q9H672 318 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 MRPL17Q9NRX2 175 aaKnown RBP28.97■■■□□ 2.23
SMDT1-203ENST00000484235 CHST7Q9NS84 486 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 CLDND1Q9NY35 253 aa28.97■■■□□ 2.23
SMDT1-203ENST00000484235 SF3B1O75533 1304 aaKnown RBP eCLIP28.96■■■□□ 2.23
SMDT1-203ENST00000484235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.96■■■□□ 2.23
SMDT1-203ENST00000484235 TGFB1I1O43294 461 aa28.96■■■□□ 2.23
SMDT1-203ENST00000484235 GADD45BO75293 160 aaPredicted RBP28.96■■■□□ 2.23
SMDT1-203ENST00000484235 RHOBTB3O94955 611 aa28.96■■■□□ 2.23
SMDT1-203ENST00000484235 CYP3A5P20815 502 aa28.96■■■□□ 2.23
SMDT1-203ENST00000484235 CA8P35219 290 aa28.96■■■□□ 2.23
SMDT1-203ENST00000484235 SPAG1Q07617 926 aa28.96■■■□□ 2.23
SMDT1-203ENST00000484235 PTPN14Q15678 1187 aa28.96■■■□□ 2.23
SMDT1-203ENST00000484235 KNOP1Q1ED39 458 aaKnown RBP28.96■■■□□ 2.23
SMDT1-203ENST00000484235 USP41Q3LFD5 358 aa28.96■■■□□ 2.23
SMDT1-203ENST00000484235 NELFCDQ8IXH7 590 aa28.96■■■□□ 2.23
SMDT1-203ENST00000484235 C1QTNF1Q9BXJ1 281 aa28.96■■■□□ 2.23
SMDT1-203ENST00000484235 PCIF1Q9H4Z3 704 aa28.96■■■□□ 2.23
SMDT1-203ENST00000484235 HOOK1Q9UJC3 728 aaKnown RBP28.96■■■□□ 2.23
SMDT1-203ENST00000484235 UBQLN1Q9UMX0 589 aaKnown RBP28.96■■■□□ 2.23
SMDT1-203ENST00000484235 DERAQ9Y315 318 aa28.96■■■□□ 2.23
SMDT1-203ENST00000484235 XPOTO43592 962 aaKnown RBP28.95■■■□□ 2.22
SMDT1-203ENST00000484235 EXTL3O43909 919 aa28.95■■■□□ 2.22
SMDT1-203ENST00000484235 LILRB3O75022 631 aa28.95■■■□□ 2.22
SMDT1-203ENST00000484235 URODP06132 367 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms