RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 HACE1Q8IYU2 909 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 RNF168Q8IYW5 571 aaPredicted RBP10.98□□□□□ -0.65
CPSF4-213ENST00000484112 HDAC7Q8WUI4 952 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 SPIRE2Q8WWL2 714 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 RAD54LQ92698 747 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 PYM1Q9BRP8 204 aaKnown RBP10.98□□□□□ -0.65
CPSF4-213ENST00000484112 NTPCRQ9BSD7 190 aaKnown RBP10.98□□□□□ -0.65
CPSF4-213ENST00000484112 RPP25Q9BUL9 199 aaKnown RBP10.98□□□□□ -0.65
CPSF4-213ENST00000484112 RHOBTB2Q9BYZ6 727 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 FZD8Q9H461 694 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 CUEDC2Q9H467 287 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 CHST7Q9NS84 486 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 KLK14Q9P0G3 267 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 PARP2Q9UGN5 583 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 ZMYM2Q9UBW7 1377 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 CFAP54Q96N23 3096 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 A0A087WWV3 80 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 LRRIQ4A6NIV6 560 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 NPTXRO95502 500 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 SMTNP53814 917 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 GPC5P78333 572 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 KRT85P78386 507 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 CEBPZQ03701 1054 aaKnown RBP10.97□□□□□ -0.65
CPSF4-213ENST00000484112 GRIN1Q05586 938 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 SNW1Q13573 536 aaKnown RBP10.97□□□□□ -0.65
CPSF4-213ENST00000484112 HTR4Q13639 388 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 ZRSR1Q15695 479 aaKnown RBP10.97□□□□□ -0.65
CPSF4-213ENST00000484112 PRSS55Q6UWB4 352 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-213ENST00000484112 PARM1Q6UWI2 310 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 KCNK18Q7Z418 384 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 APBB1IPQ7Z5R6 666 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-213ENST00000484112 GRASPQ7Z6J2 395 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-213ENST00000484112 CEP57Q86XR8 500 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 SPRYD3Q8NCJ5 442 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 DEPTORQ8TB45 409 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 HASPINQ8TF76 798 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 LARP4BQ92615 738 aaKnown RBP10.97□□□□□ -0.65
CPSF4-213ENST00000484112 RUBCNQ92622 972 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 LRRC27Q9C0I9 530 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 SCAND2PQ9GZW5 306 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-213ENST00000484112 NXF3Q9H4D5 531 aaKnown RBP10.97□□□□□ -0.65
CPSF4-213ENST00000484112 TMEM134Q9H6X4 195 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 GPRC5CQ9NQ84 441 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.97□□□□□ -0.65
CPSF4-213ENST00000484112 ZDHHC7Q9NXF8 308 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 DLGAP2Q9P1A6 1054 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 LARSQ9P2J5 1176 aaKnown RBP10.97□□□□□ -0.65
CPSF4-213ENST00000484112 CACNG4Q9UBN1 327 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 RCOR1Q9UKL0 485 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 POLIQ9UNA4 740 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 GIT1Q9Y2X7 761 aa10.97□□□□□ -0.65
CPSF4-213ENST00000484112 A0A1B0GUA9 196 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 ANHXE9PGG2 379 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 ACKR2O00590 384 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 B4GALT5O43286 388 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 HIP1RO75146 1068 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 ZMYND10O75800 440 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 EFEMP2O95967 443 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 PLS3P13797 630 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 GLULP15104 373 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 ARF4P18085 180 aaPredicted RBP10.96□□□□□ -0.65
CPSF4-213ENST00000484112 PLCG1P19174 1290 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 NTHL1P78549 312 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 PKP1Q13835 747 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 PUM1Q14671 1186 aaKnown RBP eCLIP10.96□□□□□ -0.65
CPSF4-213ENST00000484112 KARSQ15046 597 aaKnown RBP10.96□□□□□ -0.65
CPSF4-213ENST00000484112 AMHR2Q16671 573 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 RRAGBQ5VZM2 374 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 SLC27A1Q6PCB7 646 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 LILRA6Q6PI73 481 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 MAEAQ7L5Y9 396 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 PJA1Q8NG27 643 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 FGF14Q92915 247 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 SHDQ96IW2 340 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 EPSTI1Q96J88 318 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 RUSC1Q9BVN2 902 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 CCDC113Q9H0I3 377 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 MAGEF1Q9HAY2 307 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 SLC2A4RGQ9NR83 387 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 BLOC1S4Q9NUP1 217 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 SPATA6Q9NWH7 488 aaPredicted RBP10.96□□□□□ -0.65
CPSF4-213ENST00000484112 FNIP2Q9P278 1114 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 TFIP11Q9UBB9 837 aaKnown RBP10.96□□□□□ -0.65
CPSF4-213ENST00000484112 ADAM28Q9UKQ2 775 aa10.96□□□□□ -0.65
CPSF4-213ENST00000484112 CASTOR2A6NHX0 329 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 K7ERI5 159 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 N4BP3O15049 544 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 CCL16O15467 120 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 KINO60870 393 aaKnown RBP10.95□□□□□ -0.66
CPSF4-213ENST00000484112 NPTX2P47972 431 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 ZNF131P52739 623 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 STARD6P59095 220 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 CREMQ03060 361 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 GRIK3Q13003 919 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 MAPK7Q13164 816 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 PRPF4BQ13523 1007 aaKnown RBP10.95□□□□□ -0.66
CPSF4-213ENST00000484112 HSP90AA2PQ14568 343 aaPredicted RBP10.95□□□□□ -0.66
CPSF4-213ENST00000484112 UBXN2BQ14CS0 331 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 RTP2Q5QGT7 225 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 PPM1LQ5SGD2 360 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms