RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 CROCCP2Q86T23 111 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 TMEM110Q86TL2 294 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 PALB2Q86YC2 1186 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 SLC35G2Q8TBE7 412 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 ETNPPLQ8TBG4 499 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 CRYGNQ8WXF5 182 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 MIS12Q9H081 205 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 DNM3Q9UQ16 869 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 SNX24Q9Y343 169 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 STAT3P40763 770 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 POLGP54098 1239 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 OXCT1P55809 520 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 SULT2A1Q06520 285 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 MPP2Q14168 576 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 DPP8Q6V1X1 898 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 HS2ST1Q7LGA3 356 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 SLC51AQ86UW1 340 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 SCUBE1Q8IWY4 988 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 SLC15A3Q8IY34 581 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 GLG1Q92896 1179 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 ZNF184Q99676 751 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 STMN4Q9H169 189 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 ASCC2Q9H1I8 757 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 KRT82Q9NSB4 513 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 LARSQ9P2J5 1176 aaKnown RBP12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 PPP1R9AQ9ULJ8 1098 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 SPATA31A5Q5VU36 1347 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 SPATA31A7Q8IWB4 1347 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 PASKQ96RG2 1323 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 USP17L10C9JJH3 530 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 MAP3K7O43318 606 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 RAD21O60216 631 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 SPATA31C1P0DKV0 1188 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 MARK3P27448 753 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 SLC34A1Q06495 639 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 ACVR2BQ13705 512 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 MTFR1Q15390 333 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 GSTA3Q16772 222 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 ZDHHC24Q6UX98 284 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 MARK2Q7KZI7 788 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 ADAT2Q7Z6V5 191 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 PPFIBP2Q8ND30 876 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 ARHGEF2Q92974 986 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 HAUS1Q96CS2 278 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 LRRC37BQ96QE4 947 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 TMEM109Q9BVC6 243 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 STK33Q9BYT3 514 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 ANO3Q9BYT9 981 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 OSGEPQ9NPF4 335 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 RTCBQ9Y3I0 505 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 TRIM43BA6NCK2 446 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 FAM196BA6NMK8 535 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 CAPN15O75808 1086 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 CASP4P49662 377 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 HADHBP55084 474 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 AP1B1Q10567 949 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 AP3B2Q13367 1082 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.3□□□□□ -0.443e-6■■■□□ 15.1
SEC61A1-205ENST00000483956 ACSBG2Q5FVE4 666 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 MAP7D3Q8IWC1 876 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 CTNNBL1Q8WYA6 563 aaPredicted RBP12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 FAM81BQ96LP2 452 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 GPR101Q96P66 508 aaPredicted RBP12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 NR1H4Q96RI1 486 aaPredicted RBP12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 OLFML3Q9NRN5 406 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 TMOD4Q9NZQ9 345 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 CNOT7Q9UIV1 285 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 FRMPD4Q14CM0 1322 aa12.3□□□□□ -0.44
SEC61A1-205ENST00000483956 UBAP1LF5GYI3 381 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 BOLA2-SMG1P6H3BVE0 249 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 HSPA6P17066 643 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 MLH1P40692 756 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 GALK1P51570 392 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 EIF6P56537 245 aaKnown RBP12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 PSMC6P62333 389 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 MAPK7Q13164 816 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 LONRF1Q17RB8 773 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 KIAA1755Q5JYT7 1200 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 MFSD14BQ5SR56 506 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 GJB7Q6PEY0 223 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 SMIM5Q71RC9 77 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 CCDC80Q76M96 950 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 CLEC10AQ8IUN9 316 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 KCTD17Q8N5Z5 321 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 CATSPER2Q96P56 530 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 MIPEPQ99797 713 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 RASAL2Q9UJF2 1139 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 USP17L15C9J2P7 530 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 USP17L13C9JLJ4 530 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 USP17L11C9JVI0 530 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 USP17L18D6R9N7 530 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 USP17L22D6RA61 530 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 USP17L17D6RBQ6 530 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 USP17L19D6RCP7 530 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 USP17L20D6RJB6 530 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 KIAA0391O15091 583 aaKnown RBP12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 OR6B1O95007 311 aa12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 ADARP55265 1226 aaKnown RBP12.29□□□□□ -0.44
SEC61A1-205ENST00000483956 USP17L24Q0WX57 530 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms