RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CFAP20Q9Y6A4 193 aaKnown RBP5.17□□□□□ -1.58
PTCD3-214ENST00000483925 MROH6A6NGR9 719 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 ISM1B1AKI9 464 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 B4E171 279 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 MATN3O15232 486 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 AKAP8O43823 692 aaKnown RBP5.16□□□□□ -1.58
PTCD3-214ENST00000483925 CLEC2LP0C7M8 214 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 TSHRP16473 764 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 BCL6P41182 706 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 TSPAN7P41732 249 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 ALDH9A1P49189 494 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 RAB1AP62820 205 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 DAG1Q14118 895 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 TMEM132BQ14DG7 1078 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 POSTNQ15063 836 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 ARL13BQ3SXY8 428 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 ARMC3Q5W041 872 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 TIGD7Q6NT04 549 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-214ENST00000483925 GGT6Q6P531 493 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 BORAQ6PGQ7 559 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 CD300LDQ6UXZ3 194 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 GALNT15Q8N3T1 639 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 TTC30BQ8N4P2 665 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 ESX1Q8N693 406 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 TTLL6Q8N841 843 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 C7orf31Q8N865 590 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 RSAD2Q8WXG1 361 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 FATE1Q969F0 183 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 HDAC10Q969S8 669 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 MTFMTQ96DP5 389 aaKnown RBP5.16□□□□□ -1.58
PTCD3-214ENST00000483925 JAM3Q9BX67 310 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 ACE2Q9BYF1 805 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-214ENST00000483925 MAGEH1Q9H213 219 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 JMJD4Q9H9V9 463 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 ATP6V0A4Q9HBG4 840 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 SMYD2Q9NRG4 433 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 IRAK4Q9NWZ3 460 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 DACT1Q9NYF0 836 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 MARCH2Q9P0N8 246 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 SIK3Q9Y2K2 1263 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 FRMD4BQ9Y2L6 1034 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 NR2E3Q9Y5X4 410 aa5.16□□□□□ -1.58
PTCD3-214ENST00000483925 ST20-MTHFSA0A0A6YYL1 179 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 MAN2B1O00754 1011 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 KCNK3O14649 394 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 PLOD3O60568 738 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 PLA2G6O60733 806 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 GFPT2O94808 682 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 FTLP02792 175 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-214ENST00000483925 PARP1P09874 1014 aaKnown RBP5.15□□□□□ -1.59
PTCD3-214ENST00000483925 ZNF20P17024 532 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 EDNRBP24530 442 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 PDIA3P30101 505 aaKnown RBP5.15□□□□□ -1.59
PTCD3-214ENST00000483925 GJA4P35212 333 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 ZEB1P37275 1124 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-214ENST00000483925 WASP42768 502 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 TAF11Q15544 211 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 CCNG2Q16589 344 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 PFKFB4Q16877 469 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 MPEG1Q2M385 716 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 PITRM1Q5JRX3 1037 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 HABP4Q5JVS0 413 aaKnown RBP5.15□□□□□ -1.59
PTCD3-214ENST00000483925 MCTP2Q6DN12 878 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 KLHDC10Q6PID8 442 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 TTC7BQ86TV6 843 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 ZC3H18Q86VM9 953 aaKnown RBP5.15□□□□□ -1.59
PTCD3-214ENST00000483925 CHST13Q8NET6 341 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 RIN2Q8WYP3 895 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-214ENST00000483925 ANKS1AQ92625 1134 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 DPF3Q92784 378 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 ZNF566Q969W8 418 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 RGMAQ96B86 450 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 FAM167BQ9BTA0 163 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 AP1M1Q9BXS5 423 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 KRTAP3-1Q9BYR8 98 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 EPB41L1Q9H4G0 881 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 SH3GLB2Q9NR46 395 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 NKIRAS2Q9NYR9 191 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 DPP7Q9UHL4 492 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 FBXO10Q9UK96 956 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 SRPK3Q9UPE1 567 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 LIMCH1Q9UPQ0 1083 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 ATP23Q9Y6H3 246 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 NUMBLQ9Y6R0 609 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 ZNF536O15090 1300 aa5.15□□□□□ -1.59
PTCD3-214ENST00000483925 A0A1W2PPL8 197 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 TCRBV5S4A2TA0A5A2 114 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 PRSS38A1L453 326 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 F5H0A9 414 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-214ENST00000483925 HNRNPDLO14979 420 aaKnown RBP5.14□□□□□ -1.59
PTCD3-214ENST00000483925 SGSM2O43147 1006 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 DGKIO75912 1065 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 LPLP06858 475 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 COL6A2P12110 1019 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 VEGFAP15692 232 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-214ENST00000483925 SDHAP31040 664 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 HOXD12P35452 270 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 MAP2K6P52564 334 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 MALLQ13021 153 aa5.14□□□□□ -1.59
PTCD3-214ENST00000483925 PMS2P11Q13670 270 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms