RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SCP2P22307 547 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 NOP2P46087 812 aaKnown RBP9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 OSTNP61366 133 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 MCL1Q07820 350 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 OLFML2BQ68BL8 750 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 C17orf99Q6UX52 265 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 TSHZ1Q6ZSZ6 1077 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 USP37Q86T82 979 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 RPUSD2Q8IZ73 545 aaKnown RBP9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 TNS4Q8IZW8 715 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 GPR161Q8N6U8 529 aaKnown RBP9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 ZNF296Q8WUU4 475 aaPredicted RBP9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 NT5C1BQ96P26 610 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 RHOXF2Q9BQY4 288 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 FDXACB1Q9BRP7 624 aaPredicted RBP9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 ZCCHC17Q9NP64 241 aaKnown RBP9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 COG5Q9UP83 839 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 UMODL1Q5DID0 1318 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 KIAA0391O15091 583 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 MEFVO15553 781 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 DYNC1LI2O43237 492 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 HOXD8P13378 290 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 PRLRP16471 622 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 MFAP3P55082 362 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 FMO1Q01740 532 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 ENPEPQ07075 957 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 MAP2K5Q13163 448 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 BIRC3Q13489 604 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 MEI1Q5TIA1 1274 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 THNSL1Q8IYQ7 743 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 OR6J1Q8NGC5 347 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 TPCN2Q8NHX9 752 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 SLC35G2Q8TBE7 412 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 DDX1Q92499 740 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 ARHGAP39Q9C0H5 1083 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 CPSF3Q9UKF6 684 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 GNEQ9Y223 722 aaKnown RBP9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 DAAM1Q9Y4D1 1078 aa9.52□□□□□ -0.89
CDC42SE1-204ENST00000483763 GPR25O00155 361 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 CLSTN1O94985 981 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 LDHAP00338 332 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 FTLP02792 175 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 CCDC172P0C7W6 258 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZNF865P0CJ78 1059 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 CYP2B6P20813 491 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 MRPS25P82663 173 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 GCNT1Q02742 428 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 TNFAIP2Q03169 654 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 HIC1Q14526 733 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 AMHR2Q16671 573 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZNF484Q5JVG2 852 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 ATF7IP2Q5U623 682 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 IQSEC1Q6DN90 963 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 MTHFD1LQ6UB35 978 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 BRSK2Q8IWQ3 736 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZBTB8OSQ8IWT0 167 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 TXLNBQ8N3L3 684 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 USP6NLQ92738 828 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 FAM212AQ96EL1 285 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 HINFPQ9BQA5 517 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 MTMR12Q9C0I1 747 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 SETD4Q9NVD3 440 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 GJD2Q9UKL4 321 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 HYOU1Q9Y4L1 999 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 NUB1Q9Y5A7 615 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZSWIM8A7E2V4 1837 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 OGTO15294 1046 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 SEC31AO94979 1220 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 ACO1P21399 889 aaKnown RBP9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 PIK3CAP42336 1068 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 DMTNQ08495 405 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 EXOC8Q8IYI6 725 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 KIAA0319LQ8IZA0 1049 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 KAT2BQ92831 832 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 CGRRF1Q99675 332 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 JPH2Q9BR39 696 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 ISCUQ9H1K1 167 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 SLC5A4Q9NY91 659 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 INTUQ9ULD6 942 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 AKT3Q9Y243 479 aa9.51□□□□□ -0.89
CDC42SE1-204ENST00000483763 BUB1BO60566 1050 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 CFHP08603 1231 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 HOXC6P09630 235 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 TMEM253P0C7T8 217 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 KRT5P13647 590 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 RNASE9P60153 205 aaKnown RBP9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 C2orf54Q08AI8 447 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 TMEM62Q0P6H9 643 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 PPFIA1Q13136 1202 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 GRIK4Q16099 956 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 DGKDQ16760 1214 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZNF568Q3ZCX4 644 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 MPZL3Q6UWV2 235 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 SLFN11Q7Z7L1 901 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 EFCAB13Q8IY85 973 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 CPB2Q96IY4 423 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 NFKBIZQ9BYH8 718 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 C2orf40Q9H1Z8 148 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 CDT1Q9H211 546 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 C1orf112Q9NSG2 853 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms