RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ASPHQ12797 758 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 EXOC3L4Q17RC7 722 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 LRRC36Q1X8D7 754 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 DUPD1Q68J44 220 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 FBXL19Q6PCT2 694 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 USP43Q70EL4 1123 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 MB21D2Q8IYB1 491 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 ADSSL1Q8N142 457 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 ZNF280CQ8ND82 737 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 C10orf82Q8WW14 230 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 ANKS1AQ92625 1134 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 MCUR1Q96AQ8 359 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 CTRCQ99895 268 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 SLCO1B3Q9NPD5 702 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 SAR1AQ9NR31 198 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 FAM207AQ9NSI2 230 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 MAGEC2Q9UBF1 373 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 PHTF1Q9UMS5 762 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 RTCBQ9Y3I0 505 aaKnown RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 SLC12A7Q9Y666 1083 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 LTBP4Q8N2S1 1624 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 FMN2Q9NZ56 1722 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 A8MXQ7 604 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 RBAK-RBAKDNI3L0D1 243 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 GUCY1B2O75343 617 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 BAG2O95816 211 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 POLR2EP19388 210 aaKnown RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 UBA7P41226 1012 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 AQP4P55087 323 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 TXNRD1Q16881 649 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 RILPL1Q5EBL4 403 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 RRAGAQ7L523 313 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 MTDHQ86UE4 582 aaKnown RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 DIS3L2Q8IYB7 885 aaKnown RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 CENPSQ8N2Z9 138 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 DCLK2Q8N568 766 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 LZTR1Q8N653 840 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 PTCD3Q96EY7 689 aaKnown RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 TRIM47Q96LD4 638 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 OSBPL6Q9BZF3 934 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 ARL8BQ9NVJ2 186 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 GID8Q9NWU2 228 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 GIN1Q9NXP7 522 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 RRN3Q9NYV6 651 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 KLHL3Q9UH77 587 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 DBNLQ9UJU6 430 aaKnown RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 ZBTB1Q9Y2K1 713 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 CEPT1Q9Y6K0 416 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 AK5Q9Y6K8 562 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 NWD2Q9ULI1 1742 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 AQP9O43315 295 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 RIPK2O43353 540 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 STAMBPO95630 424 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 ESRRAP11474 423 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 GLULP15104 373 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 ATP6V1B1P15313 513 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 DDX5P17844 614 aaKnown RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 DNAJC3Q13217 504 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 NR5A1Q13285 461 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 SEPT6Q14141 434 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 TMEM266Q2M3C6 531 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 HGSNATQ68CP4 663 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 DCLRE1AQ6PJP8 1040 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 POTEHQ6S545 545 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 CCDC81Q6ZN84 652 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 NLRP9Q7RTR0 991 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 ERI1Q8IV48 349 aaKnown RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 METTL13Q8N6R0 699 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 EME1Q96AY2 570 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 EFHD2Q96C19 240 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 MRPL1Q9BYD6 325 aaKnown RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 PARVGQ9HBI0 331 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 KCNJ14Q9UNX9 436 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 LZTS1Q9Y250 596 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 NR2E1Q9Y466 385 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 SLC30A1Q9Y6M5 507 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 PFDN6O15212 129 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 KMOO15229 486 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 HNRNPCL1O60812 293 aaKnown RBP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 BRAFP15056 766 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 IFIT5Q13325 482 aaKnown RBP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 NIPAL1Q6NVV3 410 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 PACSIN1Q9BY11 444 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 TMEM60Q9H2L4 133 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 A6NL46 340 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 ATMINO43313 823 aaPredicted RBP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 PON1P27169 355 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 PPARGP37231 505 aaPredicted RBP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 PCYT1AP49585 367 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 METAP2P50579 478 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 KCNC4Q03721 635 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 TNIP1Q15025 636 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 EFTUD2Q15029 972 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL4A5-205ENST00000483338 MMEL1Q495T6 779 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 ANKRD20A4Q4UJ75 823 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 BORAQ6PGQ7 559 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 NLRX1Q86UT6 975 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 VPS52Q8N1B4 723 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 UIMC1Q96RL1 719 aa8.28□□□□□ -1.08
COL4A5-205ENST00000483338 SEZ6LQ9BYH1 1024 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms