RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 NCAM2O15394 837 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 ECI2O75521 394 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 B3GAT3O94766 335 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 CTDNEP1O95476 244 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 RHOP08100 348 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 POU2F2P09086 479 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 ATP2B1P20020 1258 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 FGFR3P22607 806 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 TARSP26639 723 aaKnown RBP8.15□□□□□ -1.1
CSDE1-206ENST00000483030 KRT2P35908 639 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 MAGEA9P43362 315 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 PRPF4BQ13523 1007 aaKnown RBP8.15□□□□□ -1.1
CSDE1-206ENST00000483030 NAB2Q15742 525 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 MAPK6Q16659 721 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 FAM187BQ17R55 369 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 EEF1DP3Q658K8 133 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 TANGO2Q6ICL3 276 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-206ENST00000483030 ZNF852Q6ZMS4 543 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 TPRG1Q6ZUI0 275 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 ZBTB8OSQ8IWT0 167 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 GPR161Q8N6U8 529 aaKnown RBP8.15□□□□□ -1.1
CSDE1-206ENST00000483030 MCPH1Q8NEM0 835 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 TNFRSF25Q93038 417 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 SECISBP2LQ93073 1101 aaKnown RBP8.15□□□□□ -1.1
CSDE1-206ENST00000483030 CLDN23Q96B33 292 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 HEBP1Q9NRV9 189 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 MTRRQ9UBK8 725 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 TPCN1Q9ULQ1 816 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 SMG5Q9UPR3 1016 aaKnown RBP8.15□□□□□ -1.1
CSDE1-206ENST00000483030 GDAQ9Y2T3 454 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 CDY1Q9Y6F8 540 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 WDR81Q562E7 1941 aa8.15□□□□□ -1.11
CSDE1-206ENST00000483030 CEP250Q9BV73 2442 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 CACNA1IQ9P0X4 2223 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 STK36Q9NRP7 1315 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 DCDC2BA2VCK2 349 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 SHISA7A6NL88 538 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 BTBD18B2RXH4 712 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 ACKR2O00590 384 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 WNT7AO00755 349 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 TBC1D4O60343 1298 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 PFKFB2O60825 505 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 LILRB5O75023 590 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 KRT37O76014 449 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 PRKCBP05771 671 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 SPATA31C1P0DKV0 1188 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 FDPSP14324 419 aaKnown RBP8.14□□□□□ -1.11
CSDE1-206ENST00000483030 PTPN2P17706 415 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 SDHBP21912 280 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 TGM1P22735 817 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 TKTP29401 623 aaKnown RBP8.14□□□□□ -1.11
CSDE1-206ENST00000483030 RPS9P46781 194 aaKnown RBP8.14□□□□□ -1.11
CSDE1-206ENST00000483030 CLCNKBP51801 687 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 ADCY1Q08828 1119 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 MTAPQ13126 283 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 FZD5Q13467 585 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 SLC5A9Q2M3M2 681 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 GLRA4Q5JXX5 417 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 CDCA2Q69YH5 1023 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-206ENST00000483030 CD300LGQ6UXG3 332 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 RTL10Q7L3V2 364 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 CATSPER3Q86XQ3 398 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 BSNDQ8WZ55 320 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 NELL1Q92832 810 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 MTMR9Q96QG7 549 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 ADPGKQ9BRR6 497 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 C2orf40Q9H1Z8 148 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 EPC1Q9H2F5 836 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 POLD4Q9HCU8 107 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 BRMS1Q9HCU9 246 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 GDE1Q9NZC3 331 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 CDV3Q9UKY7 258 aaKnown RBP8.14□□□□□ -1.11
CSDE1-206ENST00000483030 USP18Q9UMW8 372 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 NDRG2Q9UN36 371 aaKnown RBP8.14□□□□□ -1.11
CSDE1-206ENST00000483030 MRPS17Q9Y2R5 130 aaKnown RBP8.14□□□□□ -1.11
CSDE1-206ENST00000483030 BACE2Q9Y5Z0 518 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 DOCK8Q8NF50 2099 aa8.14□□□□□ -1.11
CSDE1-206ENST00000483030 DMXL1Q9Y485 3027 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 PRR5-ARHGAP8B1AHC4 643 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 TMEM189-UBE2V1I3L0A0 370 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 EPB41L2O43491 1005 aaKnown RBP8.13□□□□□ -1.11
CSDE1-206ENST00000483030 TRAPPC3O43617 180 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 NEMFO60524 1076 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 MED24O75448 989 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 LRG1P02750 347 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 EDN1P05305 212 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 CEBPBP17676 345 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 CYP11B2P19099 503 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 ELF1P32519 619 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 BRCC3P46736 316 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 RBM25P49756 843 aaKnown RBP8.13□□□□□ -1.11
CSDE1-206ENST00000483030 FOSBP53539 338 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 ARPP19P56211 112 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 ARHGAP8P85298 464 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 LMNB2Q03252 620 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 GRM2Q14416 872 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 UPP1Q16831 310 aa8.13□□□□□ -1.11
CSDE1-206ENST00000483030 LCE2DQ5TA82 110 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-206ENST00000483030 PADI6Q6TGC4 694 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms