RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 LACTBL1A8MY62 500 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 TMEM189-UBE2V1I3L0A0 370 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 MEFVO15553 781 aaPredicted RBP18.04■□□□□ 0.48
HMGN1-214ENST00000482733 EXTL3O43909 919 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 KINO60870 393 aaKnown RBP18.04■□□□□ 0.48
HMGN1-214ENST00000482733 CXCL14O95715 111 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 EFEMP2O95967 443 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 CYP3A5P20815 502 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 HOXD13P35453 343 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 ACOT2P49753 483 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 HYAL1Q12794 435 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 ELAVL2Q12926 359 aaKnown RBP18.04■□□□□ 0.48
HMGN1-214ENST00000482733 STK4Q13043 487 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 UPP1Q16831 310 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 KNOP1Q1ED39 458 aaKnown RBP18.04■□□□□ 0.48
HMGN1-214ENST00000482733 FUT10Q6P4F1 479 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 CLEC17AQ6ZS10 378 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 GPR65Q8IYL9 337 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 RNF168Q8IYW5 571 aaPredicted RBP18.04■□□□□ 0.48
HMGN1-214ENST00000482733 GOLGA5Q8TBA6 731 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 PABPC5Q96DU9 382 aaKnown RBP18.04■□□□□ 0.48
HMGN1-214ENST00000482733 KIF12Q96FN5 646 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 CBWD1Q9BRT8 395 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 VN1R3Q9BXE9 311 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 RMND1Q9NWS8 449 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 THEGQ9P2T0 379 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 UBQLN1Q9UMX0 589 aaKnown RBP18.04■□□□□ 0.48
HMGN1-214ENST00000482733 DERAQ9Y315 318 aa18.04■□□□□ 0.48
HMGN1-214ENST00000482733 EYSQ5T1H1 3165 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 GADD45BO75293 160 aaPredicted RBP18.03■□□□□ 0.48
HMGN1-214ENST00000482733 IL18RAPO95256 599 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 SMC2O95347 1197 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 URODP06132 367 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 CLCNKBP51801 687 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 COL19A1Q14993 1142 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 ADGRD2Q7Z7M1 963 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 NELFCDQ8IXH7 590 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 GPD1LQ8N335 351 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 KIAA0895Q8NCT3 520 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 FAM212AQ96EL1 285 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 PAAF1Q9BRP4 392 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 FAM213AQ9BRX8 229 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 KIAA1586Q9HCI6 787 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 MRPL17Q9NRX2 175 aaKnown RBP18.03■□□□□ 0.48
HMGN1-214ENST00000482733 AGPAT3Q9NRZ7 376 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 C2CD2Q9Y426 696 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 PCDHGC5Q9Y5F6 944 aa18.03■□□□□ 0.48
HMGN1-214ENST00000482733 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-214ENST00000482733 C2orf71A6NGG8 1288 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 PODXLO00592 558 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 TGFB1I1O43294 461 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 TRAPPC3O43617 180 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 B3GAT3O94766 335 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 KIF4AO95239 1232 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 CA8P35219 290 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 NRIP1P48552 1158 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 GLUD2P49448 558 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 SOX4Q06945 474 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-214ENST00000482733 ZBTB6Q15916 424 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 DUSP6Q16828 381 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 AAK1Q2M2I8 961 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 USP41Q3LFD5 358 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 KIAA1841Q6NSI8 718 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 CRELD2Q6UXH1 353 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-214ENST00000482733 NT5DC4Q86YG4 428 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 BRSK2Q8IWQ3 736 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 EFHBQ8N7U6 833 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 ATXN2LQ8WWM7 1075 aaKnown RBP18.02■□□□□ 0.48
HMGN1-214ENST00000482733 RABGGTAQ92696 567 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 C18orf25Q96B23 403 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-214ENST00000482733 SAAL1Q96ER3 474 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 GSDMAQ96QA5 445 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 GTPBP4Q9BZE4 634 aaKnown RBP18.02■□□□□ 0.48
HMGN1-214ENST00000482733 IGFLR1Q9H665 355 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 GOLGA2P5Q9HBQ8 144 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 CHST7Q9NS84 486 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 CACNG4Q9UBN1 327 aa18.02■□□□□ 0.48
HMGN1-214ENST00000482733 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.01■□□□□ 0.47
HMGN1-214ENST00000482733 HIDE1A8MVS5 230 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 F8W810 466 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 PRPF40AO75400 957 aaKnown RBP18.01■□□□□ 0.47
HMGN1-214ENST00000482733 LRPAP1P30533 357 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 DSG1Q02413 1049 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 PNOCQ13519 176 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 TMEM132DQ14C87 1099 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 PTPN14Q15678 1187 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 CTC1Q2NKJ3 1217 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 RBM23Q86U06 439 aaKnown RBP18.01■□□□□ 0.47
HMGN1-214ENST00000482733 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.01■□□□□ 0.47
HMGN1-214ENST00000482733 C12orf56Q8IXR9 622 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 BEST2Q8NFU1 509 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 EMILIN2Q9BXX0 1053 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 GPR62Q9BZJ7 368 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 PCIF1Q9H4Z3 704 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 UBE2ZQ9H832 354 aaPredicted RBP18.01■□□□□ 0.47
HMGN1-214ENST00000482733 CLDND1Q9NY35 253 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 RBAKQ9NYW8 714 aaPredicted RBP18.01■□□□□ 0.47
HMGN1-214ENST00000482733 HSPBP1Q9NZL4 362 aa18.01■□□□□ 0.47
HMGN1-214ENST00000482733 ZNF233A6NK53 670 aa18■□□□□ 0.47
HMGN1-214ENST00000482733 PER2O15055 1255 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms