RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 CLTAP09496 248 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 CXCL8P10145 99 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 GAP43P17677 238 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 SP100P23497 879 aaPredicted RBP18.07■□□□□ 0.48
VAMP4-204ENST00000482519 ABCD1P33897 745 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 TNFSF9P41273 254 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 GTF2BQ00403 316 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 ITIH3Q06033 890 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 UPP1Q16831 310 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 SLC10A6Q3KNW5 377 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 XKR4Q5GH76 650 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 HERC4Q5GLZ8 1057 aaPredicted RBP18.07■□□□□ 0.48
VAMP4-204ENST00000482519 RTP2Q5QGT7 225 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 ATL3Q6DD88 541 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 DCLRE1AQ6PJP8 1040 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 TMC5Q6UXY8 1006 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 ZNF720Q7Z2F6 126 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 SUSD6Q92537 303 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 DNAJC19Q96DA6 116 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 TTPALQ9BTX7 342 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 PHF7Q9BWX1 381 aaPredicted RBP18.07■□□□□ 0.48
VAMP4-204ENST00000482519 ADAM7Q9H2U9 754 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 RXFP1Q9HBX9 757 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 TSHZ2Q9NRE2 1034 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 CNTN3Q9P232 1028 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 PCDHA7Q9UN72 937 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 TISP43B9A030 160 aa18.06■□□□□ 0.48
VAMP4-204ENST00000482519 I3L4J1 428 aa18.06■□□□□ 0.48
VAMP4-204ENST00000482519 GLUD1P00367 558 aa18.06■□□□□ 0.48
VAMP4-204ENST00000482519 KCNE1P15382 129 aa18.06■□□□□ 0.48
VAMP4-204ENST00000482519 ELAVL2Q12926 359 aaKnown RBP18.06■□□□□ 0.48
VAMP4-204ENST00000482519 ZBTB41Q5SVQ8 909 aa18.06■□□□□ 0.48
VAMP4-204ENST00000482519 AXDND1Q5T1B0 1012 aaPredicted RBP18.06■□□□□ 0.48
VAMP4-204ENST00000482519 MAP4K3Q8IVH8 894 aa18.06■□□□□ 0.48
VAMP4-204ENST00000482519 FAM212AQ96EL1 285 aa18.06■□□□□ 0.48
VAMP4-204ENST00000482519 DDX27Q96GQ7 796 aaKnown RBP18.06■□□□□ 0.48
VAMP4-204ENST00000482519 MAN1C1Q9NR34 630 aa18.06■□□□□ 0.48
VAMP4-204ENST00000482519 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.06■□□□□ 0.48
VAMP4-204ENST00000482519 PANK4Q9NVE7 773 aa18.06■□□□□ 0.48
VAMP4-204ENST00000482519 FAM13BQ9NYF5 915 aa18.06■□□□□ 0.48
VAMP4-204ENST00000482519 SEL1LQ9UBV2 794 aa18.06■□□□□ 0.48
VAMP4-204ENST00000482519 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.05■□□□□ 0.48
VAMP4-204ENST00000482519 ANKRD63C9JTQ0 380 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 PODXLO00592 558 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 OGTO15294 1046 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 TRAPPC3O43617 180 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 GCNT3O95395 438 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 PIGRP01833 764 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 BRCC3P46736 316 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 PPP2R3AQ06190 1150 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 BECN1Q14457 450 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 ATAT1Q5SQI0 421 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 ADALQ6DHV7 355 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 SLC39A4Q6P5W5 647 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 IQUBQ8NA54 791 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 C3orf58Q8NDZ4 430 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 KCNN1Q92952 543 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 CHAMP1Q96JM3 812 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 RIPOR3Q96MK2 946 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 LRRC27Q9C0I9 530 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 IKZF4Q9H2S9 585 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 ST6GALNAC4Q9H4F1 302 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 SFXN1Q9H9B4 322 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 RPF1Q9H9Y2 349 aaKnown RBP18.05■□□□□ 0.48
VAMP4-204ENST00000482519 PLXNA3P51805 1871 aa18.05■□□□□ 0.48
VAMP4-204ENST00000482519 A0A0B4J269 797 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 POLR2DO15514 142 aaKnown RBP18.04■□□□□ 0.48
VAMP4-204ENST00000482519 CREMQ03060 361 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 E2F4Q16254 413 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 PSMD5Q16401 504 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 KYAT1Q16773 422 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 ELMSAN1Q6PJG2 1045 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 RNF135Q8IUD6 432 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 CCDC65Q8IXS2 484 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 SYCP3Q8IZU3 236 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 FEZF2Q8TBJ5 459 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 KIF12Q96FN5 646 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 TNMDQ9H2S6 317 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 PLEKHA5Q9HAU0 1116 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 FNIP2Q9P278 1114 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 TUBGCP4Q9UGJ1 667 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 RCOR1Q9UKL0 485 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 ZDHHC9Q9Y397 364 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 NUB1Q9Y5A7 615 aa18.04■□□□□ 0.48
VAMP4-204ENST00000482519 LACTBL1A8MY62 500 aa18.03■□□□□ 0.48
VAMP4-204ENST00000482519 TMEM189-UBE2V1I3L0A0 370 aa18.03■□□□□ 0.48
VAMP4-204ENST00000482519 TGM5O43548 720 aa18.03■□□□□ 0.48
VAMP4-204ENST00000482519 RPL9P32969 192 aaKnown RBP18.03■□□□□ 0.48
VAMP4-204ENST00000482519 MTHFRP42898 656 aa18.03■□□□□ 0.48
VAMP4-204ENST00000482519 ACOT2P49753 483 aa18.03■□□□□ 0.48
VAMP4-204ENST00000482519 CASP5P51878 434 aa18.03■□□□□ 0.48
VAMP4-204ENST00000482519 AMPD3Q01432 767 aa18.03■□□□□ 0.48
VAMP4-204ENST00000482519 KCNA1Q09470 495 aa18.03■□□□□ 0.48
VAMP4-204ENST00000482519 ENOX2Q16206 610 aaKnown RBP18.03■□□□□ 0.48
VAMP4-204ENST00000482519 SLFN12LQ6IEE8 588 aa18.03■□□□□ 0.48
VAMP4-204ENST00000482519 CD300LGQ6UXG3 332 aa18.03■□□□□ 0.48
VAMP4-204ENST00000482519 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.03■□□□□ 0.48
VAMP4-204ENST00000482519 TMEM130Q8N3G9 435 aa18.03■□□□□ 0.48
VAMP4-204ENST00000482519 LNX1Q8TBB1 728 aaPredicted RBP18.03■□□□□ 0.48
VAMP4-204ENST00000482519 PIK3R5Q8WYR1 880 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms