RNA–Protein interactions for RNA: ENST00000482458.1

STK40-208, Transcript of serine/threonine kinase 40, human

TSL 3

Gene STK40, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STK40-208	ENST00000482458	ARHGEF35	A5YM69	484 aa		27.81	■■■□□ 2.04
STK40-208	ENST00000482458	SPTLC1	O15269	473 aa		27.81	■■■□□ 2.04
STK40-208	ENST00000482458	LARGE1	O95461	756 aa		27.81	■■■□□ 2.04
STK40-208	ENST00000482458	CYP11B2	P19099	503 aa		27.81	■■■□□ 2.04
STK40-208	ENST00000482458	MCM7	P33993	719 aa		27.81	■■■□□ 2.04
STK40-208	ENST00000482458	TRIM29	Q14134	588 aa		27.81	■■■□□ 2.04
STK40-208	ENST00000482458	RTL10	Q7L3V2	364 aa		27.81	■■■□□ 2.04
STK40-208	ENST00000482458	NSUN7	Q8NE18	718 aa	Known RBP	27.81	■■■□□ 2.04
STK40-208	ENST00000482458	POLR3C	Q9BUI4	534 aa	Predicted RBP	27.81	■■■□□ 2.04
STK40-208	ENST00000482458	DLL3	Q9NYJ7	618 aa		27.81	■■■□□ 2.04
STK40-208	ENST00000482458	TKT	P29401	623 aa	Known RBP	27.8	■■■□□ 2.04
STK40-208	ENST00000482458	MAGEA9	P43362	315 aa		27.8	■■■□□ 2.04
STK40-208	ENST00000482458	RBM25	P49756	843 aa	Known RBP	27.8	■■■□□ 2.04
STK40-208	ENST00000482458	CLCNKB	P51801	687 aa		27.8	■■■□□ 2.04
STK40-208	ENST00000482458	PPP2R5A	Q15172	486 aa		27.8	■■■□□ 2.04
STK40-208	ENST00000482458	ME3	Q16798	604 aa		27.8	■■■□□ 2.04
STK40-208	ENST00000482458	ZBTB41	Q5SVQ8	909 aa		27.8	■■■□□ 2.04
STK40-208	ENST00000482458	TPRG1	Q6ZUI0	275 aa		27.8	■■■□□ 2.04
STK40-208	ENST00000482458	MCRS1	Q96EZ8	462 aa		27.8	■■■□□ 2.04
STK40-208	ENST00000482458	PPP1R10	Q96QC0	940 aa	Known RBP	27.8	■■■□□ 2.04
STK40-208	ENST00000482458	KIFC3	Q9BVG8	833 aa		27.8	■■■□□ 2.04
STK40-208	ENST00000482458	NCDN	Q9UBB6	729 aa		27.8	■■■□□ 2.04
STK40-208	ENST00000482458	BACE2	Q9Y5Z0	518 aa		27.8	■■■□□ 2.04
STK40-208	ENST00000482458	JAK2	O60674	1132 aa		27.79	■■■□□ 2.04
STK40-208	ENST00000482458	ECI2	O75521	394 aa		27.79	■■■□□ 2.04
STK40-208	ENST00000482458	VARS2	Q5ST30	1063 aa	Known RBP	27.79	■■■□□ 2.04
STK40-208	ENST00000482458	CD300LG	Q6UXG3	332 aa		27.79	■■■□□ 2.04
STK40-208	ENST00000482458	ANKS3	Q6ZW76	656 aa		27.79	■■■□□ 2.04
STK40-208	ENST00000482458	ATRIP	Q8WXE1	791 aa		27.79	■■■□□ 2.04
STK40-208	ENST00000482458	DDX27	Q96GQ7	796 aa	Known RBP	27.79	■■■□□ 2.04
STK40-208	ENST00000482458	BORCS6	Q96GS4	357 aa		27.79	■■■□□ 2.04
STK40-208	ENST00000482458	UROC1	Q96N76	676 aa		27.79	■■■□□ 2.04
STK40-208	ENST00000482458	PCDHGA2	Q9Y5H1	932 aa		27.79	■■■□□ 2.04
STK40-208	ENST00000482458	DNAH14	Q0VDD8	3507 aa		27.79	■■■□□ 2.04
STK40-208	ENST00000482458		I3L4J1	428 aa		27.78	■■■□□ 2.04
STK40-208	ENST00000482458	RHO	P08100	348 aa		27.78	■■■□□ 2.04
STK40-208	ENST00000482458	TARS	P26639	723 aa	Known RBP	27.78	■■■□□ 2.04
STK40-208	ENST00000482458	SLC5A9	Q2M3M2	681 aa		27.78	■■■□□ 2.04
STK40-208	ENST00000482458	ERMN	Q8TAM6	284 aa		27.78	■■■□□ 2.04
STK40-208	ENST00000482458	PLA2G2F	Q9BZM2	168 aa		27.78	■■■□□ 2.04
STK40-208	ENST00000482458	GOLGA2P5	Q9HBQ8	144 aa		27.78	■■■□□ 2.04
STK40-208	ENST00000482458	GDE1	Q9NZC3	331 aa		27.78	■■■□□ 2.04
STK40-208	ENST00000482458	NOTCH4	Q99466	2003 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	NCOR2	Q9Y618	2525 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	TRAPPC3	O43617	180 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	RPA1	P27694	616 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	EFNA5	P52803	228 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	UPP1	Q16831	310 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	RSPO4	Q2I0M5	234 aa	Predicted RBP	27.77	■■■□□ 2.04
STK40-208	ENST00000482458	NT5DC1	Q5TFE4	455 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	ATF7IP2	Q5U623	682 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	CLDN23	Q96B33	292 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	IFT74	Q96LB3	600 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	NELL2	Q99435	816 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	POLD4	Q9HCU8	107 aa		27.77	■■■□□ 2.04
STK40-208	ENST00000482458	BRCC3	P46736	316 aa		27.76	■■■□□ 2.03
STK40-208	ENST00000482458	ANAPC15	P60006	121 aa		27.76	■■■□□ 2.03
STK40-208	ENST00000482458	C3orf58	Q8NDZ4	430 aa		27.76	■■■□□ 2.03
STK40-208	ENST00000482458	ZSCAN32	Q9NX65	697 aa		27.76	■■■□□ 2.03
STK40-208	ENST00000482458	PATJ	Q8NI35	1801 aa		27.76	■■■□□ 2.03
STK40-208	ENST00000482458	NCAM2	O15394	837 aa		27.75	■■■□□ 2.03
STK40-208	ENST00000482458	CEBPB	P17676	345 aa		27.75	■■■□□ 2.03
STK40-208	ENST00000482458	ZNF852	Q6ZMS4	543 aa		27.75	■■■□□ 2.03
STK40-208	ENST00000482458	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	27.75	■■■□□ 2.03
STK40-208	ENST00000482458	ZBTB44	Q8NCP5	570 aa		27.75	■■■□□ 2.03
STK40-208	ENST00000482458	AVEN	Q9NQS1	362 aa	Predicted RBP	27.75	■■■□□ 2.03
STK40-208	ENST00000482458	HEBP1	Q9NRV9	189 aa		27.75	■■■□□ 2.03
STK40-208	ENST00000482458	DAXX	Q9UER7	740 aa	Predicted RBP	27.75	■■■□□ 2.03
STK40-208	ENST00000482458	SMIM28	A0A1B0GU29	152 aa		27.74	■■■□□ 2.03
STK40-208	ENST00000482458	PRRG1	O14668	218 aa		27.74	■■■□□ 2.03
STK40-208	ENST00000482458	LRG1	P02750	347 aa		27.74	■■■□□ 2.03
STK40-208	ENST00000482458	OR52Z1	P0C646	297 aa		27.74	■■■□□ 2.03
STK40-208	ENST00000482458	PTPN2	P17706	415 aa		27.74	■■■□□ 2.03
STK40-208	ENST00000482458	ELF1	P32519	619 aa		27.74	■■■□□ 2.03
STK40-208	ENST00000482458	RPS9	P46781	194 aa	Known RBP	27.74	■■■□□ 2.03
STK40-208	ENST00000482458	ROR1	Q01973	937 aa		27.74	■■■□□ 2.03
STK40-208	ENST00000482458	TANGO2	Q6ICL3	276 aa		27.74	■■■□□ 2.03
STK40-208	ENST00000482458	POTEH	Q6S545	545 aa		27.74	■■■□□ 2.03
STK40-208	ENST00000482458	ZNF461	Q8TAF7	563 aa		27.74	■■■□□ 2.03
STK40-208	ENST00000482458	MRPS17	Q9Y2R5	130 aa	Known RBP	27.74	■■■□□ 2.03
STK40-208	ENST00000482458	ARHGEF37	A1IGU5	675 aa		27.73	■■■□□ 2.03
STK40-208	ENST00000482458	GUCY1B3	Q02153	619 aa		27.73	■■■□□ 2.03
STK40-208	ENST00000482458	SOX4	Q06945	474 aa	Predicted RBP	27.73	■■■□□ 2.03
STK40-208	ENST00000482458	SLC8B1	Q6J4K2	584 aa		27.73	■■■□□ 2.03
STK40-208	ENST00000482458	TSSK4	Q6SA08	328 aa		27.73	■■■□□ 2.03
STK40-208	ENST00000482458	CEP120	Q8N960	986 aa		27.73	■■■□□ 2.03
STK40-208	ENST00000482458	KIFAP3	Q92845	792 aa		27.73	■■■□□ 2.03
STK40-208	ENST00000482458	ELSPBP1	Q96BH3	223 aa		27.73	■■■□□ 2.03
STK40-208	ENST00000482458	SMG5	Q9UPR3	1016 aa	Known RBP	27.73	■■■□□ 2.03
STK40-208	ENST00000482458	TNFSF13B	Q9Y275	285 aa		27.73	■■■□□ 2.03
STK40-208	ENST00000482458	YARS	P54577	528 aa	Known RBP	27.72	■■■□□ 2.03
STK40-208	ENST00000482458	ADCY1	Q08828	1119 aa		27.72	■■■□□ 2.03
STK40-208	ENST00000482458	SAFB	Q15424	915 aa	Known RBP eCLIP	27.72	■■■□□ 2.03
STK40-208	ENST00000482458	ZNF174	Q15697	407 aa		27.72	■■■□□ 2.03
STK40-208	ENST00000482458	NELL1	Q92832	810 aa		27.72	■■■□□ 2.03
STK40-208	ENST00000482458	SECISBP2L	Q93073	1101 aa	Known RBP	27.72	■■■□□ 2.03
STK40-208	ENST00000482458	CORO1B	Q9BR76	489 aa		27.72	■■■□□ 2.03
STK40-208	ENST00000482458	CCDC94	Q9BW85	323 aa	Predicted RBP	27.72	■■■□□ 2.03
STK40-208	ENST00000482458	EPC1	Q9H2F5	836 aa		27.72	■■■□□ 2.03
STK40-208	ENST00000482458	TOPORS	Q9NS56	1045 aa	Predicted RBP	27.72	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms