RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ZNF165P49910 485 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 DLG4P78352 724 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 TFAMQ00059 246 aaKnown RBP14.35□□□□□ -0.11
HDAC1-208ENST00000482310 NFIL3Q16649 462 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 TCERG1LQ5VWI1 586 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 SPRED2Q7Z698 418 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 ZNF280BQ86YH2 543 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 EFCAB13Q8IY85 973 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 LRRC43Q8N309 656 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 GSTCDQ8NEC7 633 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 PLEKHO2Q8TD55 490 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 ZNF689Q96CS4 500 aaPredicted RBP14.35□□□□□ -0.11
HDAC1-208ENST00000482310 FBXL18Q96ME1 805 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 RAD9AQ99638 391 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 PBX4Q9BYU1 374 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 NKX2-4Q9H2Z4 354 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 KIAA1586Q9HCI6 787 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 CNTN3Q9P232 1028 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 DNAJB4Q9UDY4 337 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 NFE2L3Q9Y4A8 694 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 INSL6Q9Y581 213 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 MRPL42Q9Y6G3 142 aaKnown RBP14.35□□□□□ -0.11
HDAC1-208ENST00000482310 PTPRJQ12913 1337 aa14.35□□□□□ -0.11
HDAC1-208ENST00000482310 CHD9Q3L8U1 2897 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-208ENST00000482310 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-208ENST00000482310 DDHD2O94830 711 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 ARHGEF15O94989 841 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 CSPG5O95196 566 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 IL18RAPO95256 599 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 THP07101 528 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 HTRA4P83105 476 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-208ENST00000482310 MYL5Q02045 173 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 SOX4Q06945 474 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-208ENST00000482310 GRIK3Q13003 919 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 SPATA1Q5VX52 437 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 GPR153Q6NV75 609 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 ZC3H3Q8IXZ2 948 aaKnown RBP14.34□□□□□ -0.11
HDAC1-208ENST00000482310 CMTR2Q8IYT2 770 aaKnown RBP14.34□□□□□ -0.11
HDAC1-208ENST00000482310 FIBCD1Q8N539 461 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 RNF214Q8ND24 703 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 HASPINQ8TF76 798 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 CNOT6LQ96LI5 555 aaKnown RBP14.34□□□□□ -0.11
HDAC1-208ENST00000482310 CEP63Q96MT8 703 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 MRPL9Q9BYD2 267 aaKnown RBP14.34□□□□□ -0.11
HDAC1-208ENST00000482310 MTMR12Q9C0I1 747 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 CERS4Q9HA82 394 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 RC3H2Q9HBD1 1191 aaKnown RBP14.34□□□□□ -0.11
HDAC1-208ENST00000482310 CBX8Q9HC52 389 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 SAMSN1Q9NSI8 373 aaKnown RBP14.34□□□□□ -0.11
HDAC1-208ENST00000482310 PRG3Q9Y2Y8 225 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-208ENST00000482310 VWA8A3KMH1 1905 aa14.34□□□□□ -0.11
HDAC1-208ENST00000482310 CHD7Q9P2D1 2997 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 LRRIQ3A6PVS8 624 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-208ENST00000482310 BECN2A8MW95 431 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 NT5C1B-RDH14C9J2C7 533 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 SLC16A3O15427 465 aaKnown RBP14.33□□□□□ -0.12
HDAC1-208ENST00000482310 FGFR1OPO95684 399 aaKnown RBP14.33□□□□□ -0.12
HDAC1-208ENST00000482310 TMEM191BP0C7N4 346 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 OR1G1P47890 313 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 VAMP7P51809 220 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 MYBPC2Q14324 1141 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 PSMD6Q15008 389 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 ALKAL1Q6UXT8 129 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 FAM43BQ6ZT52 329 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-208ENST00000482310 LUZP1Q86V48 1076 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 DHX40Q8IX18 779 aaKnown RBP14.33□□□□□ -0.12
HDAC1-208ENST00000482310 OR5B17Q8NGF7 314 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 ENOX1Q8TC92 643 aaKnown RBP14.33□□□□□ -0.12
HDAC1-208ENST00000482310 MFSD14AQ96MC6 490 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 PPP1R10Q96QC0 940 aaKnown RBP14.33□□□□□ -0.12
HDAC1-208ENST00000482310 CGRRF1Q99675 332 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 PAAF1Q9BRP4 392 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 NRDE2Q9H7Z3 1164 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.33□□□□□ -0.122e-6■■■■■ 33.2
HDAC1-208ENST00000482310 FANCLQ9NW38 375 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 MAGEC2Q9UBF1 373 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-208ENST00000482310 ARMCX3Q9UH62 379 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-208ENST00000482310 MSRAQ9UJ68 235 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 TSC2P49815 1807 aa14.33□□□□□ -0.12
HDAC1-208ENST00000482310 F8W810 466 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 PES1O00541 588 aaKnown RBP14.32□□□□□ -0.12
HDAC1-208ENST00000482310 KRT19P08727 400 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 KCNE1P15382 129 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 MTIF2P46199 727 aaKnown RBP14.32□□□□□ -0.12
HDAC1-208ENST00000482310 BFSP1Q12934 665 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 BIRC3Q13489 604 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 HSP90AA2PQ14568 343 aaPredicted RBP14.32□□□□□ -0.12
HDAC1-208ENST00000482310 PPP2R2DQ66LE6 453 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 INTS8Q75QN2 995 aaKnown RBP14.32□□□□□ -0.12
HDAC1-208ENST00000482310 FILIP1Q7Z7B0 1213 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 CD302Q8IX05 232 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 BEST2Q8NFU1 509 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 PARD3BQ8TEW8 1205 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 ANKRD36BP1Q96IX9 119 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 MKNK1Q9BUB5 465 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 THAP9Q9H5L6 903 aa14.32□□□□□ -0.12
HDAC1-208ENST00000482310 ASB7Q9H672 318 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms