RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.74■■□□□ 1.07
MSH5-215ENST00000482280 TGM5O43548 720 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 STK38Q15208 465 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 PTPAQ15257 358 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 NAB2Q15742 525 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 UPP1Q16831 310 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 FAM173BQ6P4H8 233 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 CCDC73Q6ZRK6 1079 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 SUGP1Q8IWZ8 645 aaKnown RBP21.73■■□□□ 1.07
MSH5-215ENST00000482280 KREMEN2Q8NCW0 462 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 SNX21Q969T3 373 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 EPSTI1Q96J88 318 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 ZBTB45Q96K62 511 aaPredicted RBP21.73■■□□□ 1.07
MSH5-215ENST00000482280 ZNF396Q96N95 335 aaPredicted RBP21.73■■□□□ 1.07
MSH5-215ENST00000482280 CXCL16Q9H2A7 254 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 ZDHHC7Q9NXF8 308 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 RAPGEFL1Q9UHV5 662 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 FBXO2Q9UK22 296 aaPredicted RBP21.73■■□□□ 1.07
MSH5-215ENST00000482280 TBX20Q9UMR3 447 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 SORCS3Q9UPU3 1222 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 MTMR6Q9Y217 621 aa21.73■■□□□ 1.07
MSH5-215ENST00000482280 TMEM221A6NGB7 291 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 M0R296 226 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 CLTAP09496 248 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 KCNE1P15382 129 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 RPL9P32969 192 aaKnown RBP21.72■■□□□ 1.07
MSH5-215ENST00000482280 MCL1Q07820 350 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 SIGLEC14Q08ET2 396 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 SV2BQ7L1I2 683 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 UBALD2Q8IYN6 164 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 ZDHHC14Q8IZN3 488 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 PBXIP1Q96AQ6 731 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 FAM122AQ96E09 287 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 PLEKHA5Q9HAU0 1116 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 GOLGA2P5Q9HBQ8 144 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 CNTN3Q9P232 1028 aa21.72■■□□□ 1.07
MSH5-215ENST00000482280 PODXLO00592 558 aa21.71■■□□□ 1.07
MSH5-215ENST00000482280 XPOTO43592 962 aaKnown RBP21.71■■□□□ 1.07
MSH5-215ENST00000482280 STAT6P42226 847 aa21.71■■□□□ 1.07
MSH5-215ENST00000482280 ZNF131P52739 623 aa21.71■■□□□ 1.07
MSH5-215ENST00000482280 PPP2R3AQ06190 1150 aa21.71■■□□□ 1.07
MSH5-215ENST00000482280 XKR4Q5GH76 650 aa21.71■■□□□ 1.07
MSH5-215ENST00000482280 ALKAL1Q6UXT8 129 aa21.71■■□□□ 1.07
MSH5-215ENST00000482280 ANKS3Q6ZW76 656 aa21.71■■□□□ 1.07
MSH5-215ENST00000482280 LNX1Q8TBB1 728 aaPredicted RBP21.71■■□□□ 1.07
MSH5-215ENST00000482280 LIMD1Q9UGP4 676 aa21.71■■□□□ 1.07
MSH5-215ENST00000482280 ARIH1Q9Y4X5 557 aaPredicted RBP21.71■■□□□ 1.07
MSH5-215ENST00000482280 RFPL2O75678 378 aa21.7■■□□□ 1.06
MSH5-215ENST00000482280 GBP2P32456 591 aaPredicted RBP21.7■■□□□ 1.06
MSH5-215ENST00000482280 SLC39A14Q15043 492 aa21.7■■□□□ 1.06
MSH5-215ENST00000482280 SEZ6Q53EL9 994 aa21.7■■□□□ 1.06
MSH5-215ENST00000482280 PPM1LQ5SGD2 360 aa21.7■■□□□ 1.06
MSH5-215ENST00000482280 HFE2Q6ZVN8 426 aa21.7■■□□□ 1.06
MSH5-215ENST00000482280 DYMQ7RTS9 669 aa21.7■■□□□ 1.06
MSH5-215ENST00000482280 CLIC6Q96NY7 704 aa21.7■■□□□ 1.06
MSH5-215ENST00000482280 USP28Q96RU2 1077 aa21.7■■□□□ 1.06
MSH5-215ENST00000482280 RHOBTB2Q9BYZ6 727 aa21.7■■□□□ 1.06
MSH5-215ENST00000482280 ABLIM1O14639 778 aa21.69■■□□□ 1.06
MSH5-215ENST00000482280 FGFR3P22607 806 aa21.69■■□□□ 1.06
MSH5-215ENST00000482280 MCM4P33991 863 aa21.69■■□□□ 1.06
MSH5-215ENST00000482280 CLSTN3Q9BQT9 956 aa21.69■■□□□ 1.06
MSH5-215ENST00000482280 MSTO1Q9BUK6 570 aa21.69■■□□□ 1.06
MSH5-215ENST00000482280 PRKD2Q9BZL6 878 aa21.69■■□□□ 1.06
MSH5-215ENST00000482280 RPF1Q9H9Y2 349 aaKnown RBP21.69■■□□□ 1.06
MSH5-215ENST00000482280 WDR6Q9NNW5 1121 aaKnown RBP21.69■■□□□ 1.06
MSH5-215ENST00000482280 GTF3C3Q9Y5Q9 886 aa21.69■■□□□ 1.06
MSH5-215ENST00000482280 CLUHO75153 1309 aa21.69■■□□□ 1.06
MSH5-215ENST00000482280 H7C4K7 107 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 OGTO15294 1046 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 XYLBO75191 536 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 ZMYND10O75800 440 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 CXCL8P10145 99 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 GAP43P17677 238 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 OR1D2P34982 312 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 SLC10A6Q3KNW5 377 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 SLFN12LQ6IEE8 588 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 LILRA6Q6PI73 481 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 USP49Q70CQ1 688 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 KCNN1Q92952 543 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 C18orf25Q96B23 403 aaPredicted RBP21.68■■□□□ 1.06
MSH5-215ENST00000482280 FAM212AQ96EL1 285 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 KIF12Q96FN5 646 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 ZMAT2Q96NC0 199 aaKnown RBP21.68■■□□□ 1.06
MSH5-215ENST00000482280 MTRRQ9UBK8 725 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 SEL1LQ9UBV2 794 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 POLIQ9UNA4 740 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 CDY1Q9Y6F8 540 aa21.68■■□□□ 1.06
MSH5-215ENST00000482280 I3L4J1 428 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 SYN3O14994 580 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 C8AP07357 584 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 HNRNPA1P09651 372 aaKnown RBP eCLIP21.67■■□□□ 1.06
MSH5-215ENST00000482280 TKTP29401 623 aaKnown RBP21.67■■□□□ 1.06
MSH5-215ENST00000482280 NMT1P30419 496 aaKnown RBP21.67■■□□□ 1.06
MSH5-215ENST00000482280 ELF1P32519 619 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 BRCC3P46736 316 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 SOX4Q06945 474 aaPredicted RBP21.67■■□□□ 1.06
MSH5-215ENST00000482280 BMP8AQ7Z5Y6 402 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 APPL2Q8NEU8 664 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 DDX12PQ92771 950 aa21.67■■□□□ 1.06
MSH5-215ENST00000482280 TSPAN18Q96SJ8 248 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms