RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 PANK2Q9BZ23 570 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 EPHX3Q9H6B9 360 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 PLEKHA5Q9HAU0 1116 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 FNIP2Q9P278 1114 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 CFAP45Q9UL16 551 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 MYH15Q9Y2K3 1946 aa12.98□□□□□ -0.33
HMGN1-213ENST00000482192 A0A087X0B3 334 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 MEFVO15553 781 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-213ENST00000482192 TRAPPC3O43617 180 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 RPL9P32969 192 aaKnown RBP12.97□□□□□ -0.33
HMGN1-213ENST00000482192 MTHFRP42898 656 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 SOX4Q06945 474 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-213ENST00000482192 SLC10A6Q3KNW5 377 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 FOXD4L6Q3SYB3 417 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-213ENST00000482192 ZC2HC1CQ53FD0 456 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-213ENST00000482192 ATAT1Q5SQI0 421 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 FOXD4L3Q6VB84 417 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-213ENST00000482192 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-213ENST00000482192 ZNF720Q7Z2F6 126 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 CEP57Q86XR8 500 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 C12orf76Q8N812 135 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-213ENST00000482192 PIK3R5Q8WYR1 880 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 RPGRIP1Q96KN7 1286 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 MSTO1Q9BUK6 570 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 LRRC27Q9C0I9 530 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 HAPLN2Q9GZV7 340 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 CUEDC2Q9H467 287 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 MRPL44Q9H9J2 332 aaKnown RBP12.97□□□□□ -0.33
HMGN1-213ENST00000482192 GOLGA2P5Q9HBQ8 144 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 MAN1C1Q9NR34 630 aa12.97□□□□□ -0.33
HMGN1-213ENST00000482192 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-213ENST00000482192 A0A0B4J269 797 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 OGTO15294 1046 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 DCXO43602 365 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 FAM189A1O60320 539 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 CXCL8P10145 99 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 IDEP14735 1019 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 FGFR3P22607 806 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 ME1P48163 572 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 PPP2R3AQ06190 1150 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 SLFN12LQ6IEE8 588 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 SHC4Q6S5L8 630 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 PRSS55Q6UWB4 352 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-213ENST00000482192 TMC5Q6UXY8 1006 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 C15orf39Q6ZRI6 1047 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 RNF135Q8IUD6 432 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 HDAC7Q8WUI4 952 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 TNMDQ9H2S6 317 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 OLFML3Q9NRN5 406 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 CDH22Q9UJ99 828 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 EXOC7Q9UPT5 735 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 NR2E1Q9Y466 385 aa12.96□□□□□ -0.33
HMGN1-213ENST00000482192 MYH11P35749 1972 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 TTC26A0AVF1 554 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 FRMD3A2A2Y4 597 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 PODXLO00592 558 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 TGM5O43548 720 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 PPP1R37O75864 691 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 WEE2P0C1S8 567 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 RPL17P18621 184 aaKnown RBP12.95□□□□□ -0.34
HMGN1-213ENST00000482192 TNFSF9P41273 254 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 DNM1Q05193 864 aaKnown RBP12.95□□□□□ -0.34
HMGN1-213ENST00000482192 E2F4Q16254 413 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 PSMD5Q16401 504 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 HERC4Q5GLZ8 1057 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-213ENST00000482192 AXDND1Q5T1B0 1012 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-213ENST00000482192 KANK3Q6NY19 840 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 SLC39A4Q6P5W5 647 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 GPR149Q86SP6 731 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 PALB2Q86YC2 1186 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 IQUBQ8NA54 791 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 C3orf58Q8NDZ4 430 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 CMASQ8NFW8 434 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-213ENST00000482192 LNX1Q8TBB1 728 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-213ENST00000482192 C18orf25Q96B23 403 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-213ENST00000482192 TSPAN18Q96SJ8 248 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 PLEKHA4Q9H4M7 779 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 POMKQ9H5K3 350 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 PANK4Q9NVE7 773 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 NUB1Q9Y5A7 615 aa12.95□□□□□ -0.34
HMGN1-213ENST00000482192 ANKRD63C9JTQ0 380 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 XPOTO43592 962 aaKnown RBP12.94□□□□□ -0.34
HMGN1-213ENST00000482192 GCNT3O95395 438 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 IGFBP6P24592 240 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-213ENST00000482192 AMPD3Q01432 767 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 ALCAMQ13740 583 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 ENOX2Q16206 610 aaKnown RBP12.94□□□□□ -0.34
HMGN1-213ENST00000482192 TMEM31Q5JXX7 168 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 ZBTB41Q5SVQ8 909 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 ADALQ6DHV7 355 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 LILRA6Q6PI73 481 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 CD300LGQ6UXG3 332 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 CYP26C1Q6V0L0 522 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 ANKS3Q6ZW76 656 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 CD302Q8IX05 232 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 CCDC65Q8IXS2 484 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 DHX58Q96C10 678 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 KIF12Q96FN5 646 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms