RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 URGCPQ8TCY9 931 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 SCFD1Q8WVM8 642 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 POF1BQ8WVV4 589 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 HVCN1Q96D96 273 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 ZNF558Q96NG5 402 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 MRPL9Q9BYD2 267 aaKnown RBP11.56□□□□□ -0.56
SSBP1-210ENST00000481508 LRRC27Q9C0I9 530 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 SLC39A2Q9NP94 309 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 MARCH5Q9NX47 278 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 KCNG1Q9UIX4 513 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 RWDD3Q9Y3V2 267 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 STYXL1Q9Y6J8 313 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 PVALEFA0A1B0GWK0 134 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 CLDN3O15551 220 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 RPN1P04843 607 aaKnown RBP11.55□□□□□ -0.56
SSBP1-210ENST00000481508 RB1P06400 928 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 HOXB1P14653 301 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-210ENST00000481508 POU3F3P20264 500 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-210ENST00000481508 MATR3P43243 847 aaKnown RBP eCLIP11.55□□□□□ -0.56
SSBP1-210ENST00000481508 ERVFC1P60507 584 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 FAM160A1Q05DH4 1040 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 SOX4Q06945 474 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-210ENST00000481508 SPAG1Q07617 926 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 GRIK3Q13003 919 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 STK4Q13043 487 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 PNOCQ13519 176 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 SLC10A6Q3KNW5 377 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 XKR4Q5GH76 650 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 CRELD2Q6UXH1 353 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-210ENST00000481508 ADGRD2Q7Z7M1 963 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 NELFCDQ8IXH7 590 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 HACE1Q8IYU2 909 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 P2RX5Q93086 422 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 PPP1R10Q96QC0 940 aaKnown RBP11.55□□□□□ -0.56
SSBP1-210ENST00000481508 ACCSQ96QU6 501 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 CBWD1Q9BRT8 395 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 C11orf84Q9BUA3 381 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-210ENST00000481508 CCDC94Q9BW85 323 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-210ENST00000481508 PLVAPQ9BX97 442 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 GOLGA2P5Q9HBQ8 144 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 UBN1Q9NPG3 1134 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 SCN1AP35498 2009 aa11.55□□□□□ -0.56
SSBP1-210ENST00000481508 SMIM28A0A1B0GU29 152 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 GOLGA6L4A6NEF3 574 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 CASTOR2A6NHX0 329 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 NRP1O14786 923 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 FSCN2O14926 492 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 TGFB1I1O43294 461 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 PRPF40AO75400 957 aaKnown RBP11.54□□□□□ -0.56
SSBP1-210ENST00000481508 OR1G1P47890 313 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 ACOT2P49753 483 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 GUCY2FP51841 1108 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 POSTNQ15063 836 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 ENOX2Q16206 610 aaKnown RBP11.54□□□□□ -0.56
SSBP1-210ENST00000481508 CD300LGQ6UXG3 332 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 TMEM92Q6UXU6 159 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 CLEC17AQ6ZS10 378 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 ZNF507Q8TCN5 953 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 C18orf25Q96B23 403 aaPredicted RBP11.54□□□□□ -0.56
SSBP1-210ENST00000481508 MRPL38Q96DV4 380 aaKnown RBP11.54□□□□□ -0.56
SSBP1-210ENST00000481508 SAAL1Q96ER3 474 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 FAM84AQ96KN4 292 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 ACAP3Q96P50 834 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 RPS6KC1Q96S38 1066 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 MSTO1Q9BUK6 570 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 PCIF1Q9H4Z3 704 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 AAASQ9NRG9 546 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 EXOC1Q9NV70 894 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 SPG21Q9NZD8 308 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 CNTN3Q9P232 1028 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 CPSF3Q9UKF6 684 aaKnown RBP11.54□□□□□ -0.56
SSBP1-210ENST00000481508 PRG3Q9Y2Y8 225 aaPredicted RBP11.54□□□□□ -0.56
SSBP1-210ENST00000481508 PCDHB12Q9Y5F1 795 aa11.54□□□□□ -0.56
SSBP1-210ENST00000481508 TSC2P49815 1807 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 KMT2BQ9UMN6 2715 aaPredicted RBP11.53□□□□□ -0.56
SSBP1-210ENST00000481508 TTC26A0AVF1 554 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 GOLGA8IPA6NC78 632 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 GOLGA8JA6NMD2 632 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 LACTBL1A8MY62 500 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 OGTO15294 1046 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 EIF3DO15371 548 aaKnown RBP eCLIP11.53□□□□□ -0.56
SSBP1-210ENST00000481508 EFEMP2O95967 443 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 SCP2P22307 547 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 GTF2F1P35269 517 aaKnown RBP eCLIP11.53□□□□□ -0.56
SSBP1-210ENST00000481508 PLCB3Q01970 1234 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 ALCAMQ13740 583 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 BMT2Q1RMZ1 405 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 TCEAL5Q5H9L2 206 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 TAS1R1Q7RTX1 841 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 SMYD4Q8IYR2 804 aaPredicted RBP11.53□□□□□ -0.56
SSBP1-210ENST00000481508 HASPINQ8TF76 798 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 AUTS2Q8WXX7 1259 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 POMGNT1Q8WZA1 660 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 HLA-CQ95604 372 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 IGSF21Q96ID5 467 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 TMEM175Q9BSA9 504 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 KANSL3Q9P2N6 904 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 TUBGCP4Q9UGJ1 667 aa11.53□□□□□ -0.56
SSBP1-210ENST00000481508 COG5Q9UP83 839 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms