RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 ZMYND10O75800 440 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 PMS2P54278 862 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 KNOP1Q1ED39 458 aaKnown RBP13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 NBPF20Q3BBV1 942 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 STKLD1Q8NE28 680 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 HIPK4Q8NE63 616 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 PLEKHA8Q96JA3 519 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 PARD6BQ9BYG5 372 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 PPCSQ9HAB8 311 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 BLOC1S6Q9UL45 172 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 SNX24Q9Y343 169 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 FRMD3A2A2Y4 597 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 MOCS2O96007 188 aaPredicted RBP13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 CYP2C19P33261 490 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 ACTR2P61160 394 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 OOSP2Q86WS3 158 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 DHX35Q9H5Z1 703 aaKnown RBP13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 ECT2Q9H8V3 914 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 RAVER2Q9HCJ3 691 aaKnown RBP13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 H2AFY2Q9P0M6 372 aaPredicted RBP13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 HDAC6Q9UBN7 1215 aa13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.68□□□□□ -0.22
CACNA1D-206ENST00000481478 USP17L15C9J2P7 530 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 USP17L13C9JLJ4 530 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 USP17L11C9JVI0 530 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 USP17L18D6R9N7 530 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 USP17L22D6RA61 530 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 USP17L17D6RBQ6 530 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 USP17L19D6RCP7 530 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 USP17L20D6RJB6 530 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 PALMO75781 387 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 USP17L24Q0WX57 530 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 PFKFB3Q16875 520 aaPredicted RBP13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 RAET1EQ8TD07 263 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 INTS2Q9H0H0 1204 aaKnown RBP13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 PKD2L2Q9NZM6 624 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 C3orf70A6NLC5 250 aaPredicted RBP13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 SLC26A4O43511 780 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 ADORA2BP29275 332 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 TPI1P60174 286 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 CENPPQ6IPU0 288 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 DHX40Q8IX18 779 aaKnown RBP13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 B4GALNT2Q8NHY0 566 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 SLC16A4O15374 487 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 SEC31AO94979 1220 aaKnown RBP13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 MMP10P09238 476 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 GCLMP48507 274 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 HPCAP84074 193 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 NME3Q13232 169 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 ARHGEF7Q14155 803 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 LLGL1Q15334 1064 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 FAM102AQ5T9C2 384 aaPredicted RBP13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 RUBCNQ92622 972 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 CELF1Q92879 486 aaKnown RBP13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 SYNDIG1Q9H7V2 258 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 DCP1AQ9NPI6 582 aaPredicted RBP13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 GUCA1CO95843 209 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 KRT14P02533 472 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 LRRC8EQ6NSJ5 796 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 KIF12Q96FN5 646 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 SMYD3Q9H7B4 428 aa13.67□□□□□ -0.22
CACNA1D-206ENST00000481478 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 DMC1Q14565 340 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 P3H1Q32P28 736 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 TNIP2Q8NFZ5 429 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 HINFPQ9BQA5 517 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 TMEM161AQ9NX61 479 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 PRR23D1E9PI22 279 aaPredicted RBP13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 PRR23D2P0DMB1 279 aaPredicted RBP13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 PRDX5P30044 214 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 DHX34Q14147 1143 aaKnown RBP13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 TRIM69Q86WT6 500 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 CALML6Q8TD86 181 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 RGS4P49798 205 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 GPSM2P81274 684 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 IGDCC4Q8TDY8 1250 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 MED15Q96RN5 788 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 YIPF2Q9BWQ6 316 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 GABBR1Q9UBS5 961 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 KNDC1Q76NI1 1749 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 CFAP73A6NFT4 308 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 PDAP1Q13442 181 aaKnown RBP13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 PIGOQ8TEQ8 1089 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 DYDC2Q96IM9 177 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 STN1Q9H668 368 aaKnown RBP13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 SLC38A7Q9NVC3 462 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 SLC30A1Q9Y6M5 507 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 C3P01024 1663 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 NWD1Q149M9 1564 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 DFFAO00273 331 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 ORC4O43929 436 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 DAB1O75553 588 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 SERPINB9P50453 376 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 COASYQ13057 564 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 PDIA2Q13087 525 aaKnown RBP13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 ANKRD40Q6AI12 368 aa13.66□□□□□ -0.22
CACNA1D-206ENST00000481478 SHC4Q6S5L8 630 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms