RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 KRT14P02533 472 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 IZUMO3Q5VZ72 239 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 ZBED8Q8IZ13 594 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 AGGF1Q8N302 714 aaeCLIP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 TERB1Q8NA31 727 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 SPATA33Q96N06 139 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 FRMD8Q9BZ67 464 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 SLC13A1Q9BZW2 595 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 TMEM245Q9H330 911 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 ARL2BPQ9Y2Y0 163 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 GOLGA8RI6L899 631 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 TLR2O60603 784 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 USP13Q92995 863 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 MRPL48Q96GC5 212 aaKnown RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 TUBGCP4Q9UGJ1 667 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 USP17L5A8MUK1 530 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 ATXN8OSP0DMR3 200 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 ARL4DP49703 201 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 SNRPFP62306 86 aaKnown RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 DYNLL1P63167 89 aaKnown RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 UBE2SQ16763 222 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 STRBPQ96SI9 672 aaKnown RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 DNAJC13O75165 2243 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 LRRC53A6NM62 1247 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 TOMM70O94826 608 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 CUL3Q13618 768 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 PUS3Q9BZE2 481 aaKnown RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 PLEKHA5Q9HAU0 1116 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 DCTN4Q9UJW0 460 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 DFFAO00273 331 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 MAP3K13O43283 966 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 VPS37AQ8NEZ2 397 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 ETNK1Q9HBU6 452 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 NDUFS3O75489 264 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 RXRBP28702 533 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 HNRNPH2P55795 449 aaKnown RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 PIGHQ14442 188 aaPredicted RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 ABCA8O94911 1581 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 AKT1P31749 480 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 PDCLQ13371 301 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 TEX2Q8IWB9 1127 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 DYNLL2Q96FJ2 89 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 ZC3H7BQ9UGR2 993 aaKnown RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 AGO2Q9UKV8 859 aaKnown RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 CLASP2O75122 1294 aaKnown RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 SPON2Q9BUD6 331 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 DDX28Q9NUL7 540 aaKnown RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 KCNQ3O43525 872 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 GFPT1Q06210 699 aaPredicted RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 SFSWAPQ12872 951 aaKnown RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 LXNQ9BS40 222 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 STK33Q9BYT3 514 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 QTRT2Q9H974 415 aaKnown RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 MYL2P10916 166 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 ACCSLQ4AC99 568 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 DDX42Q86XP3 938 aaKnown RBP eCLIP10.03□□□□□ -0.85e-7■■■□□ 18.8
VEGFA-212ENST00000480614 RSPH1Q8WYR4 309 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 CCDC134Q9H6E4 229 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 CATSPERBQ9H7T0 1116 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 NRKQ7Z2Y5 1582 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 CDC27P30260 824 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 TP53BP2Q13625 1128 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 TMEM132DQ14C87 1099 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 LVRNQ6Q4G3 990 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 KIAA2013Q8IYS2 634 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 SH3RF3Q8TEJ3 882 aaPredicted RBP10.03□□□□□ -0.8
VEGFA-212ENST00000480614 ATRXP46100 2492 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 POTEMA6NI47 508 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 ORC4O43929 436 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 GUCA1CO95843 209 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 BLVRAP53004 296 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 LRIG3Q6UXM1 1119 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 RHPN2Q8IUC4 686 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 ARHGEF38Q9NXL2 777 aa10.03□□□□□ -0.8
VEGFA-212ENST00000480614 TCP11X1B4DZS4 312 aa10.02□□□□□ -0.8
VEGFA-212ENST00000480614 ZBTB1Q9Y2K1 713 aa10.02□□□□□ -0.8
VEGFA-212ENST00000480614 H2AFYO75367 372 aaKnown RBP10.02□□□□□ -0.8
VEGFA-212ENST00000480614 LAMC2Q13753 1193 aa10.02□□□□□ -0.8
VEGFA-212ENST00000480614 C6orf10Q5SRN2 563 aa10.02□□□□□ -0.8
VEGFA-212ENST00000480614 RNF135Q8IUD6 432 aa10.02□□□□□ -0.8
VEGFA-212ENST00000480614 TTLL11Q8NHH1 800 aa10.02□□□□□ -0.8
VEGFA-212ENST00000480614 BARHL2Q9NY43 387 aa10.02□□□□□ -0.8
VEGFA-212ENST00000480614 MTO1Q9Y2Z2 717 aaKnown RBP10.02□□□□□ -0.8
VEGFA-212ENST00000480614 A0A1W2PQC6 194 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 PRKAB2O43741 272 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 ARSEP51690 589 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 RAD23BP54727 409 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 ANKRD40Q6AI12 368 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 PIGOQ8TEQ8 1089 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 ADNPQ9H2P0 1102 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 ASAP1Q9ULH1 1129 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 OSBP2Q969R2 916 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 MRPS26Q9BYN8 205 aaKnown RBP10.02□□□□□ -0.81
VEGFA-212ENST00000480614 RTN2O75298 545 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 CDH16O75309 829 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 ACADSBP45954 432 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 KCNJ6P48051 423 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 NFX1Q12986 1120 aaKnown RBP10.02□□□□□ -0.81
VEGFA-212ENST00000480614 PIM2Q9P1W9 311 aa10.02□□□□□ -0.81
VEGFA-212ENST00000480614 HSPA13P48723 471 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms