RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 SLC12A3P55017 1021 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 BPIFB4P59827 614 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 RPL26P61254 145 aaKnown RBP11.31□□□□□ -0.6
SIK3-210ENST00000480468 ARSHQ5FYA8 562 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 KLC3Q6P597 504 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 IZUMO2Q6UXV1 221 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 ADGRG6Q86SQ4 1221 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.31□□□□□ -0.6
SIK3-210ENST00000480468 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
SIK3-210ENST00000480468 DTX3LQ8TDB6 740 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 ZNF75CPQ92670 426 aaPredicted RBP11.31□□□□□ -0.6
SIK3-210ENST00000480468 MAML3Q96JK9 1138 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 FNBP1Q96RU3 617 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 SMC6Q96SB8 1091 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 DDX50Q9BQ39 737 aaKnown RBP11.31□□□□□ -0.6
SIK3-210ENST00000480468 KANSL3Q9P2N6 904 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 HSFX1Q9UBD0 423 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 KIAA1024Q9UPX6 916 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 MAST2Q6P0Q8 1798 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 SLIT2O94813 1529 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 NPHP3-ACAD11A0A0J9YXS1 232 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 ZBED4O75132 1171 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 KRT18P05783 430 aaKnown RBP11.31□□□□□ -0.6
SIK3-210ENST00000480468 TSPY3P0CV98 308 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 TSPY8P0CW00 308 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 RARBP10826 455 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 ANPEPP15144 967 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 GYG1P46976 350 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 MECOMQ03112 1051 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 DEUP1Q05D60 604 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 R3HDM1Q15032 1099 aaKnown RBP11.31□□□□□ -0.6
SIK3-210ENST00000480468 TRMT5Q32P41 509 aaKnown RBP11.31□□□□□ -0.6
SIK3-210ENST00000480468 SGO2Q562F6 1265 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 PLEKHG4Q58EX7 1191 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 NET1Q7Z628 596 aaPredicted RBP11.31□□□□□ -0.6
SIK3-210ENST00000480468 PHLDB2Q86SQ0 1253 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 PALB2Q86YC2 1186 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 ALDH16A1Q8IZ83 802 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 PIP4K2CQ8TBX8 421 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 CFAP57Q96MR6 1250 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 CATSPER2Q96P56 530 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 POP1Q99575 1024 aaKnown RBP11.31□□□□□ -0.6
SIK3-210ENST00000480468 NAP1L4Q99733 375 aaKnown RBP11.31□□□□□ -0.6
SIK3-210ENST00000480468 MKNK1Q9BUB5 465 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
SIK3-210ENST00000480468 GPAMQ9HCL2 828 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 MCM9Q9NXL9 1143 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 TAS2R1Q9NYW7 299 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 WASF2Q9Y6W5 498 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 ASTN1O14525 1302 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 POTECB2RU33 542 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 TYROBPO43914 113 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 SPAG7O75391 227 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 FTLP02792 175 aaPredicted RBP11.3□□□□□ -0.6
SIK3-210ENST00000480468 GOLGA8HP0CJ92 632 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 ADCY1Q08828 1119 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 THOC5Q13769 683 aaKnown RBP11.3□□□□□ -0.6
SIK3-210ENST00000480468 CAVIN4Q5BKX8 364 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 CADPS2Q86UW7 1296 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 SCYL3Q8IZE3 742 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 PSPC1Q8WXF1 523 aaKnown RBP11.3□□□□□ -0.6
SIK3-210ENST00000480468 SKA1Q96BD8 255 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 FAM163AQ96GL9 167 aaPredicted RBP11.3□□□□□ -0.6
SIK3-210ENST00000480468 OSBPL8Q9BZF1 889 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.3□□□□□ -0.6
SIK3-210ENST00000480468 KIAA1586Q9HCI6 787 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 NPHS2Q9NP85 383 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 NDE1Q9NXR1 346 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 TMOD3Q9NYL9 352 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 APEX2Q9UBZ4 518 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 DDX25Q9UHL0 483 aaKnown RBP11.3□□□□□ -0.6
SIK3-210ENST00000480468 PCDHA12Q9UN75 941 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 SSX2IPQ9Y2D8 614 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 MTO1Q9Y2Z2 717 aaKnown RBP11.3□□□□□ -0.6
SIK3-210ENST00000480468 NUMBLQ9Y6R0 609 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 SHANK3Q9BYB0 1731 aa11.3□□□□□ -0.6
SIK3-210ENST00000480468 EXOC1LA0A1B0GW35 172 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 RAD21O60216 631 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 SPATA31D3P0C874 917 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 GCAP28676 217 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 ALDH1B1P30837 517 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 RPA3P35244 121 aaPredicted RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 CETN2P41208 172 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 FMO5P49326 533 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 CASP4P49662 377 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 HPCAP84074 193 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 XIAPP98170 497 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 CACNB1Q02641 598 aaPredicted RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 CDC16Q13042 620 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 MESDQ14696 234 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 Q4G0T1 1027 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 PPP1R18Q6NYC8 613 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 CCDC62Q6P9F0 684 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 SPATA31D4Q6ZUB0 917 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 ANKS1BQ7Z6G8 1248 aa11.29□□□□□ -0.6
SIK3-210ENST00000480468 SYT2Q8N9I0 419 aaPredicted RBP11.29□□□□□ -0.6
SIK3-210ENST00000480468 WDR66Q8TBY9 1149 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms