RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 CCDC34Q96HJ3 373 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 COLEC11Q9BWP8 271 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 PCIF1Q9H4Z3 704 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 TUBGCP4Q9UGJ1 667 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 ADAM28Q9UKQ2 775 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 PLXNA3P51805 1871 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.13□□□□□ -0.31
CCM2-212ENST00000480382 GOLGA8IPA6NC78 632 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 GOLGA8JA6NMD2 632 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 HIDE1A8MVS5 230 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 LACTBL1A8MY62 500 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 TGFB1I1O43294 461 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 RHOBTB3O94955 611 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 NRIP1P48552 1158 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 PSMD2Q13200 908 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 FUT10Q6P4F1 479 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 CRELD2Q6UXH1 353 aaPredicted RBP13.13□□□□□ -0.31
CCM2-212ENST00000480382 TAS1R1Q7RTX1 841 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 RBM23Q86U06 439 aaKnown RBP13.13□□□□□ -0.31
CCM2-212ENST00000480382 RNF168Q8IYW5 571 aaPredicted RBP13.13□□□□□ -0.31
CCM2-212ENST00000480382 C3orf58Q8NDZ4 430 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 ERCC4Q92889 916 aaPredicted RBP13.13□□□□□ -0.31
CCM2-212ENST00000480382 CCDC47Q96A33 483 aaKnown RBP13.13□□□□□ -0.31
CCM2-212ENST00000480382 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 UROC1Q96N76 676 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 HERC2P3Q9BVR0 1158 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 IGFLR1Q9H665 355 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 PLEKHA5Q9HAU0 1116 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 AGPAT3Q9NRZ7 376 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 SLC38A7Q9NVC3 462 aa13.13□□□□□ -0.31
CCM2-212ENST00000480382 BRWD1Q9NSI6 2320 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 TSC2P49815 1807 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 PODXLO00592 558 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 PER2O15055 1255 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 CLIC2O15247 247 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
CCM2-212ENST00000480382 PRPF40AO75400 957 aaKnown RBP13.12□□□□□ -0.31
CCM2-212ENST00000480382 TADA2AO75478 443 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 EFEMP2O95967 443 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 SOD2P04179 222 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 NFICP08651 508 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 CTSAP10619 480 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 IGFBP6P24592 240 aaPredicted RBP13.12□□□□□ -0.31
CCM2-212ENST00000480382 WNT7BP56706 349 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 UBE2HP62256 183 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 KCNB1Q14721 858 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 UPP1Q16831 310 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 JADE1Q6IE81 842 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 PDE12Q6L8Q7 609 aaKnown RBP13.12□□□□□ -0.31
CCM2-212ENST00000480382 PPP2R3CQ969Q6 453 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 B3GALT6Q96L58 329 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 GPR62Q9BZJ7 368 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 NGRNQ9NPE2 291 aaKnown RBP13.12□□□□□ -0.31
CCM2-212ENST00000480382 RBAKQ9NYW8 714 aaPredicted RBP13.12□□□□□ -0.31
CCM2-212ENST00000480382 THEGQ9P2T0 379 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 STK39Q9UEW8 545 aa13.12□□□□□ -0.31
CCM2-212ENST00000480382 SF3B1O75533 1304 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCM2-212ENST00000480382 C2orf71A6NGG8 1288 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 TMEM189-UBE2V1I3L0A0 370 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 TULP1O00294 542 aaPredicted RBP13.11□□□□□ -0.31
CCM2-212ENST00000480382 C2CD2LO14523 706 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 LINC01565O15544 149 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 EXTL3O43909 919 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 B3GAT3O94766 335 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 CXCL14O95715 111 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 LDHAP00338 332 aaKnown RBP13.11□□□□□ -0.31
CCM2-212ENST00000480382 URODP06132 367 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 ADRB2P07550 413 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 GLUD2P49448 558 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 GUCY2FP51841 1108 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 TMEM132DQ14C87 1099 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 PTPN14Q15678 1187 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 DUSP6Q16828 381 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 KNOP1Q1ED39 458 aaKnown RBP13.11□□□□□ -0.31
CCM2-212ENST00000480382 CLEC17AQ6ZS10 378 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 EP400NLQ6ZTU2 488 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 BRSK2Q8IWQ3 736 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 CD302Q8IX05 232 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 TLE6Q9H808 572 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 UBE2ZQ9H832 354 aaPredicted RBP13.11□□□□□ -0.31
CCM2-212ENST00000480382 CLDND1Q9NY35 253 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 HSPBP1Q9NZL4 362 aa13.11□□□□□ -0.31
CCM2-212ENST00000480382 UBQLN1Q9UMX0 589 aaKnown RBP13.11□□□□□ -0.31
CCM2-212ENST00000480382 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
CCM2-212ENST00000480382 XPOTO43592 962 aaKnown RBP13.1□□□□□ -0.31
CCM2-212ENST00000480382 IL18RAPO95256 599 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 BRCC3P46736 316 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 CYP2J2P51589 502 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 RBM10P98175 930 aaKnown RBP13.1□□□□□ -0.31
CCM2-212ENST00000480382 TFF2Q03403 129 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 BMS1Q14692 1282 aaKnown RBP13.1□□□□□ -0.31
CCM2-212ENST00000480382 COL19A1Q14993 1142 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 ZBTB6Q15916 424 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 CD300LGQ6UXG3 332 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 HS2ST1Q7LGA3 356 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 CBWD2Q8IUF1 395 aa13.1□□□□□ -0.31
CCM2-212ENST00000480382 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCM2-212ENST00000480382 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms