RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 UBXN11Q5T124 520 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 RARS2Q5T160 578 aaKnown RBP9.91□□□□□ -0.82
VCP-206ENST00000480327 ATF7IP2Q5U623 682 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 NOTUMQ6P988 496 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 PPP4R3CPQ6ZMV5 832 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 ZBTB33Q86T24 672 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 ZNF280BQ86YH2 543 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 ABI1Q8IZP0 508 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 VPS52Q8N1B4 723 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 IGSF21Q96ID5 467 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 PRRX2Q99811 253 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 APOL6Q9BWW8 343 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 MRPL4Q9BYD3 311 aaKnown RBP9.91□□□□□ -0.82
VCP-206ENST00000480327 PDZD7Q9H5P4 517 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 CHST12Q9NRB3 414 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 OLFML3Q9NRN5 406 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 TBC1D13Q9NVG8 400 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 HOOK1Q9UJC3 728 aaKnown RBP9.91□□□□□ -0.82
VCP-206ENST00000480327 PCDHA5Q9Y5H7 936 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 IRAK3Q9Y616 596 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.9□□□□□ -0.82
VCP-206ENST00000480327 TISP43B9A030 160 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 BIN1O00499 593 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 GALR2O43603 387 aaPredicted RBP9.9□□□□□ -0.82
VCP-206ENST00000480327 GFRA3O60609 400 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 LILRB3O75022 631 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 ZC3H11AO75152 810 aaKnown RBP eCLIP9.9□□□□□ -0.82
VCP-206ENST00000480327 OFD1O75665 1012 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 SMC2O95347 1197 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 MYL1P05976 194 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 GALTP07902 379 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 CTSAP10619 480 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 AXLP30530 894 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 SLC11A1P49279 550 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 LIG4P49917 911 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 GTF2BQ00403 316 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 ITIH3Q06033 890 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 STK4Q13043 487 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 PCBP1Q15365 356 aaKnown RBP eCLIP9.9□□□□□ -0.82
VCP-206ENST00000480327 KIAA1841Q6NSI8 718 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 AGMOQ6ZNB7 445 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 ASCL5Q7RTU5 278 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 DDX53Q86TM3 631 aaKnown RBP9.9□□□□□ -0.82
VCP-206ENST00000480327 NELFCDQ8IXH7 590 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 SYCP3Q8IZU3 236 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 SMARCE1Q969G3 411 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 CCDC47Q96A33 483 aaKnown RBP9.9□□□□□ -0.82
VCP-206ENST00000480327 ZBTB45Q96K62 511 aaPredicted RBP9.9□□□□□ -0.82
VCP-206ENST00000480327 SNX27Q96L92 541 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 PRIMPOLQ96LW4 560 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 NECTIN4Q96NY8 510 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 ACO2Q99798 780 aaKnown RBP9.9□□□□□ -0.82
VCP-206ENST00000480327 TCHPQ9BT92 498 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 TRIM6Q9C030 488 aaPredicted RBP9.9□□□□□ -0.82
VCP-206ENST00000480327 FAM105AQ9NUU6 356 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 ANKFY1Q9P2R3 1169 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 SORCS3Q9UPU3 1222 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 MAPK8IP1Q9UQF2 711 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 GDAQ9Y2T3 454 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 NR2E1Q9Y466 385 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 HES2Q9Y543 173 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 PCDHB2Q9Y5E7 798 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 PCDHB13Q9Y5F0 798 aa9.9□□□□□ -0.82
VCP-206ENST00000480327 TRIP11Q15643 1979 aa9.9□□□□□ -0.83
VCP-206ENST00000480327 VWA8A3KMH1 1905 aa9.9□□□□□ -0.83
VCP-206ENST00000480327 GVINP1Q7Z2Y8 2422 aa9.9□□□□□ -0.83
VCP-206ENST00000480327 DNAH14Q0VDD8 3507 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 A0A1B0GUA9 196 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 ANKRD63C9JTQ0 380 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 PROB1E7EW31 1015 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 TULP1O00294 542 aaPredicted RBP9.89□□□□□ -0.83
VCP-206ENST00000480327 HNRNPDLO14979 420 aaKnown RBP9.89□□□□□ -0.83
VCP-206ENST00000480327 N4BP3O15049 544 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 ZNF623O75123 536 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 PPP1R37O75864 691 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 DDHD2O94830 711 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 EFEMP2O95967 443 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 MTHFRP42898 656 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 ALDH7A1P49419 539 aaKnown RBP9.89□□□□□ -0.83
VCP-206ENST00000480327 OSTNP61366 133 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 EHHADHQ08426 723 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 MTMR3Q13615 1198 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 PTPN14Q15678 1187 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 ZNF568Q3ZCX4 644 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 SEZ6Q53EL9 994 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 NOMO2Q5JPE7 1267 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 L1TD1Q5T7N2 865 aaKnown RBP9.89□□□□□ -0.83
VCP-206ENST00000480327 CWF19L1Q69YN2 538 aaKnown RBP9.89□□□□□ -0.83
VCP-206ENST00000480327 CES5AQ6NT32 575 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 SLC27A1Q6PCB7 646 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 MAP4K3Q8IVH8 894 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 UBALD2Q8IYN6 164 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 SMYD4Q8IYR2 804 aaPredicted RBP9.89□□□□□ -0.83
VCP-206ENST00000480327 ZDHHC14Q8IZN3 488 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 KIAA0895Q8NCT3 520 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 SMG8Q8ND04 991 aaKnown RBP9.89□□□□□ -0.83
VCP-206ENST00000480327 ATOH1Q92858 354 aaPredicted RBP9.89□□□□□ -0.83
VCP-206ENST00000480327 TMEM169Q96HH4 297 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 ACCSQ96QU6 501 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 ADPGKQ9BRR6 497 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms