RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 GPD1LQ8N335 351 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 CALR3Q96L12 384 aaKnown RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 AGAP1Q9UPQ3 857 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 SNX9Q9Y5X1 595 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 A0A087X0B3 334 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 ABHD14A-ACY1A0A1B0GW23 586 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 NEMP1O14524 444 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 ADCY6O43306 1168 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 THAP12O43422 761 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 BNIP3LO60238 219 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 APOEP02649 317 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 CKMP06732 381 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 FERP16591 822 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 CCND3P30281 292 aaPredicted RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 NSFP46459 744 aaKnown RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 FXR1P51114 621 aaKnown RBP eCLIP6.37□□□□□ -1.39
CPS1-207ENST00000479988 HADHQ16836 314 aaKnown RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 ARL13BQ3SXY8 428 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 CCDC14Q49A88 953 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 ZNF449Q6P9G9 518 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 FRMD5Q7Z6J6 570 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 SYN2Q92777 582 aaPredicted RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 TEPSINQ96N21 525 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 MTMR9Q96QG7 549 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 POLR3CQ9BUI4 534 aaPredicted RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 UNC45AQ9H3U1 944 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 SPG21Q9NZD8 308 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 INSL6Q9Y581 213 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 PLS3P13797 630 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 CCDC15Q0P6D6 951 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 GRB10Q13322 594 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 PCBP1Q15365 356 aaKnown RBP eCLIP6.37□□□□□ -1.39
CPS1-207ENST00000479988 LRRC31Q6UY01 552 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 C4orf19Q8IY42 314 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 RUBCNQ92622 972 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 HVCN1Q96D96 273 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 DNAJC7Q99615 494 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 CERS4Q9HA82 394 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 PDGFCQ9NRA1 345 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 TYW1Q9NV66 732 aaKnown RBP6.37□□□□□ -1.39
CPS1-207ENST00000479988 KLK14Q9P0G3 267 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 PGAP2Q9UHJ9 254 aa6.37□□□□□ -1.39
CPS1-207ENST00000479988 IFNAR2P48551 515 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 RAD51Q06609 339 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 PTK7Q13308 1070 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 KNOP1Q1ED39 458 aaKnown RBP6.36□□□□□ -1.39
CPS1-207ENST00000479988 PLPPR4Q7Z2D5 763 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 ACRBPQ8NEB7 543 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 RIN2Q8WYP3 895 aaPredicted RBP6.36□□□□□ -1.39
CPS1-207ENST00000479988 RIPOR3Q96MK2 946 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 TSNARE1Q96NA8 513 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 CYP4F11Q9HBI6 524 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 NLRC4Q9NPP4 1024 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 ZMYM2Q9UBW7 1377 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 NCAM2O15394 837 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 MAP3K13O43283 966 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 RHOXF2BP0C7M4 288 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 MYBP10242 640 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 KPNA1P52294 538 aaPredicted RBP6.36□□□□□ -1.39
CPS1-207ENST00000479988 MTFR1Q15390 333 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 SLC27A1Q6PCB7 646 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 RHOXF2Q9BQY4 288 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 SHANK3Q9BYB0 1731 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 THSD7AQ9UPZ6 1657 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 A6NJR5 290 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 SMIM22K7EJ46 135 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 GFPT2O94808 682 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 POMCP01189 267 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 CD52P31358 61 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 POLR2FP61218 127 aaKnown RBP6.36□□□□□ -1.39
CPS1-207ENST00000479988 CCDC85BQ15834 202 aaPredicted RBP6.36□□□□□ -1.39
CPS1-207ENST00000479988 Q4G0T1 1027 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 PREPLQ4J6C6 727 aaPredicted RBP6.36□□□□□ -1.39
CPS1-207ENST00000479988 TIGD5Q53EQ6 642 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 FBXO38Q6PIJ6 1188 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 RAD9BQ6WBX8 426 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 IFT20Q8IY31 132 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 MORC4Q8TE76 937 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 FAM117AQ9C073 453 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 ARHGAP39Q9C0H5 1083 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 MED4Q9NPJ6 270 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 PLAGL2Q9UPG8 496 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 USTQ9Y2C2 406 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 UBE4BO95155 1302 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 MYH2Q9UKX2 1941 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 LAMA4Q16363 1823 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 CYP3A7-CYP3A51PA0A087WV96 503 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 IGKV6D-41A0A0C4DH26 115 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 SLC16A3O15427 465 aaKnown RBP6.36□□□□□ -1.39
CPS1-207ENST00000479988 HSF2BPO75031 334 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 H2AFZP0C0S5 128 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 MYL4P12829 197 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 CYP3A7P24462 503 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 TBXAS1P24557 533 aaPredicted RBP6.36□□□□□ -1.39
CPS1-207ENST00000479988 CRYBB1P53674 252 aaPredicted RBP6.36□□□□□ -1.39
CPS1-207ENST00000479988 KRT81Q14533 505 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 RPS6KA1Q15418 735 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 TMEM119Q4V9L6 283 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 FAM171A1Q5VUB5 890 aa6.36□□□□□ -1.39
CPS1-207ENST00000479988 OR6B2Q6IFH4 312 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms