RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 ZMYM3Q14202 1370 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 DIRC3C9JPN6 131 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 ADSLP30566 484 aaPredicted RBP7.08□□□□□ -1.28
COMMD3-212ENST00000479958 PTPN7P35236 360 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 SLC5A3P53794 718 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 PER3P56645 1201 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 LY6G5CQ5SRR4 150 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 GGT6Q6P531 493 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 ZFP28Q8NHY6 868 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 LARP4BQ92615 738 aaKnown RBP7.08□□□□□ -1.28
COMMD3-212ENST00000479958 ACE2Q9BYF1 805 aaPredicted RBP7.08□□□□□ -1.28
COMMD3-212ENST00000479958 BCO1Q9HAY6 547 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 VTA1Q9NP79 307 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 GPRC5BQ9NZH0 403 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 MCM8Q9UJA3 840 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 WASHC2AQ641Q2 1341 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 HECW2Q9P2P5 1572 aa7.08□□□□□ -1.28
COMMD3-212ENST00000479958 E9PCH4 1651 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 DEPDC5O75140 1603 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 VWDEQ8N2E2 1590 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 DIP2CQ9Y2E4 1556 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 GRXCR1A8MXD5 290 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 SUV39H1O43463 412 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 RBP3P10745 1247 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 HSPA5P11021 654 aaKnown RBP7.07□□□□□ -1.28
COMMD3-212ENST00000479958 CANXP27824 592 aaKnown RBP7.07□□□□□ -1.28
COMMD3-212ENST00000479958 PTPAQ15257 358 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 ADRM1Q16186 407 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 TIGD2Q4W5G0 525 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 FAM47AQ5JRC9 791 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 TOR2AQ5JU69 321 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 CMIPQ8IY22 773 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 TFAP2CQ92754 450 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 CHFRQ96EP1 664 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 CEP89Q96ST8 783 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 SLC46A2Q9BY10 475 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 CPEB1Q9BZB8 566 aaKnown RBP7.07□□□□□ -1.28
COMMD3-212ENST00000479958 RBM12Q9NTZ6 932 aaKnown RBP7.07□□□□□ -1.28
COMMD3-212ENST00000479958 DNAJC28Q9NX36 388 aa7.07□□□□□ -1.28
COMMD3-212ENST00000479958 ITGB1P05556 798 aa7.06□□□□□ -1.28
COMMD3-212ENST00000479958 LAG3P18627 525 aa7.06□□□□□ -1.28
COMMD3-212ENST00000479958 ECHS1P30084 290 aa7.06□□□□□ -1.28
COMMD3-212ENST00000479958 FLT3LGP49771 235 aa7.06□□□□□ -1.28
COMMD3-212ENST00000479958 CCT2P78371 535 aaKnown RBP7.06□□□□□ -1.28
COMMD3-212ENST00000479958 BMT2Q1RMZ1 405 aa7.06□□□□□ -1.28
COMMD3-212ENST00000479958 KCNK18Q7Z418 384 aa7.06□□□□□ -1.28
COMMD3-212ENST00000479958 MRGPREQ86SM8 312 aa7.06□□□□□ -1.28
COMMD3-212ENST00000479958 OR7D4Q8NG98 312 aa7.06□□□□□ -1.28
COMMD3-212ENST00000479958 UHRF1Q96T88 793 aaPredicted RBP7.06□□□□□ -1.28
COMMD3-212ENST00000479958 ADI1Q9BV57 179 aa7.06□□□□□ -1.28
COMMD3-212ENST00000479958 SPC25Q9HBM1 224 aa7.06□□□□□ -1.28
COMMD3-212ENST00000479958 ATP10AO60312 1499 aa7.05□□□□□ -1.28
COMMD3-212ENST00000479958 A0A087X1B8 175 aa7.05□□□□□ -1.28
COMMD3-212ENST00000479958 RNASET2O00584 256 aaKnown RBP7.05□□□□□ -1.28
COMMD3-212ENST00000479958 PRKD3O94806 890 aa7.05□□□□□ -1.28
COMMD3-212ENST00000479958 APOBEC3AP31941 199 aaPredicted RBP7.05□□□□□ -1.28
COMMD3-212ENST00000479958 MST1LQ2TV78 715 aa7.05□□□□□ -1.28
COMMD3-212ENST00000479958 PRAMEF14Q5SWL7 426 aa7.05□□□□□ -1.28
COMMD3-212ENST00000479958 RNF187Q5TA31 235 aaPredicted RBP7.05□□□□□ -1.28
COMMD3-212ENST00000479958 MRGPRGQ86SM5 289 aa7.05□□□□□ -1.28
COMMD3-212ENST00000479958 LILRA3Q8N6C8 439 aaPredicted RBP7.05□□□□□ -1.28
COMMD3-212ENST00000479958 TSPEARQ8WU66 669 aa7.05□□□□□ -1.28
COMMD3-212ENST00000479958 TRPM5Q9NZQ8 1165 aa7.05□□□□□ -1.28
COMMD3-212ENST00000479958 EIF2AK4Q9P2K8 1649 aaKnown RBP7.05□□□□□ -1.28
COMMD3-212ENST00000479958 KANK1Q14678 1352 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 CEP152O94986 1710 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 GAGE12BA1L429 117 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 GAGE12HA6NDE8 117 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 PJA2O43164 708 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 RAMP2O60895 175 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 ABHD16AO95870 558 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 SNRPA1P09661 255 aaKnown RBP7.04□□□□□ -1.28
COMMD3-212ENST00000479958 SPATA31D3P0C874 917 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 GSPT1P15170 499 aaKnown RBP7.04□□□□□ -1.28
COMMD3-212ENST00000479958 GPR3P46089 330 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 NHLH2Q02577 135 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 DDX10Q13206 875 aaKnown RBP7.04□□□□□ -1.28
COMMD3-212ENST00000479958 ANKS6Q68DC2 871 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 KCNV1Q6PIU1 500 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 SPATA31D4Q6ZUB0 917 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 GDF7Q7Z4P5 450 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 OR10H5Q8NGA6 315 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 PROKR1Q8TCW9 393 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 RNF17Q9BXT8 1623 aaKnown RBP7.04□□□□□ -1.28
COMMD3-212ENST00000479958 UGGT1Q9NYU2 1555 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 PRDM15P57071 1507 aaPredicted RBP7.04□□□□□ -1.28
COMMD3-212ENST00000479958 CCDC144AA2RUR9 1427 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 PTPRTO14522 1441 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 SIGLEC1Q9BZZ2 1709 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 TET3O43151 1660 aa7.04□□□□□ -1.28
COMMD3-212ENST00000479958 CFAP65Q6ZU64 1925 aaKnown RBP7.03□□□□□ -1.28
COMMD3-212ENST00000479958 HLA-DOAP06340 250 aa7.03□□□□□ -1.28
COMMD3-212ENST00000479958 IL2RBP14784 551 aa7.03□□□□□ -1.28
COMMD3-212ENST00000479958 CLRN1P58418 232 aa7.03□□□□□ -1.28
COMMD3-212ENST00000479958 SRSF2Q01130 221 aaKnown RBP7.03□□□□□ -1.28
COMMD3-212ENST00000479958 MALLQ13021 153 aa7.03□□□□□ -1.28
COMMD3-212ENST00000479958 MFSD14BQ5SR56 506 aa7.03□□□□□ -1.28
COMMD3-212ENST00000479958 LAIR1Q6GTX8 287 aa7.03□□□□□ -1.28
COMMD3-212ENST00000479958 LHFPL2Q6ZUX7 228 aa7.03□□□□□ -1.28
COMMD3-212ENST00000479958 AMOTL1Q8IY63 956 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms