RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 TRIP10Q15642 601 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 SYDE2Q5VT97 1194 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 ZBTB33Q86T24 672 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 JMJD4Q9H9V9 463 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 ASAP2O43150 1006 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 TJP3O95049 919 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 MAP3K6O95382 1288 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 GH1P01241 217 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 CALCAP01258 141 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 GHRP10912 638 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 CREB1P16220 341 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 BPIFB4P59827 614 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 SEMA3FQ13275 785 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 PPP6R3Q5H9R7 873 aaPredicted RBP14.31□□□□□ -0.12
USP42-206ENST00000479544 KRT80Q6KB66 452 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 LRRC55Q6ZSA7 311 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 NUDCD3Q8IVD9 361 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 ATXN7L3BQ96GX2 97 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 TRIM56Q9BRZ2 755 aaKnown RBP14.31□□□□□ -0.12
USP42-206ENST00000479544 LXNQ9BS40 222 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 OSBPL8Q9BZF1 889 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 Q9H521 79 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 CHMP2BQ9UQN3 213 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.31□□□□□ -0.12
USP42-206ENST00000479544 PALM3A6NDB9 673 aaPredicted RBP14.31□□□□□ -0.12
USP42-206ENST00000479544 DKC1O60832 514 aaKnown RBP eCLIP14.31□□□□□ -0.12
USP42-206ENST00000479544 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.12
USP42-206ENST00000479544 AP2B1P63010 937 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 HIF1AQ16665 826 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 SNX30Q5VWJ9 437 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 C3orf62Q6ZUJ4 267 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 MIGA2Q7L4E1 593 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 HIC2Q96JB3 615 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 CSRNP1Q96S65 589 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 RXFP1Q9HBX9 757 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 AIPL1Q9NZN9 384 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 ARMCX1Q9P291 453 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 SEPT9Q9UHD8 586 aaPredicted RBP14.31□□□□□ -0.12
USP42-206ENST00000479544 IQANK1A0A1B0GTG1 560 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 F5H6K3 240 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 ZBTB39O15060 712 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 ATP9AO75110 1047 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 DNAJC8O75937 253 aaPredicted RBP14.31□□□□□ -0.12
USP42-206ENST00000479544 KLRC3Q07444 240 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 ASPHQ12797 758 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 HSP90AA5PQ58FG0 334 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 ARID3BQ8IVW6 561 aaPredicted RBP14.31□□□□□ -0.12
USP42-206ENST00000479544 FAF2Q96CS3 445 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 TRAF3IP3Q9Y228 551 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 DLG5Q8TDM6 1919 aa14.31□□□□□ -0.12
USP42-206ENST00000479544 hCG_1984214I3L0E3 225 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 SUPT3HO75486 399 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 VHLP40337 213 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 GRAPQ13588 217 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 PRKG1Q13976 671 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 NFIXQ14938 502 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 TMEM259Q4ZIN3 620 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 ZNF713Q8N859 430 aaPredicted RBP14.3□□□□□ -0.12
USP42-206ENST00000479544 GRAPLQ8TC17 118 aaPredicted RBP14.3□□□□□ -0.12
USP42-206ENST00000479544 CHURC1Q8WUH1 139 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 NMD3Q96D46 503 aaKnown RBP14.3□□□□□ -0.12
USP42-206ENST00000479544 LRGUKQ96M69 825 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 ROPN1BQ9BZX4 212 aaPredicted RBP14.3□□□□□ -0.12
USP42-206ENST00000479544 MYLK2Q9H1R3 596 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 ROPN1Q9HAT0 212 aaPredicted RBP14.3□□□□□ -0.12
USP42-206ENST00000479544 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.3□□□□□ -0.12
USP42-206ENST00000479544 SERPINB2P05120 415 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 RARAP10276 462 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 SMTNL2Q2TAL5 461 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 MMEL1Q495T6 779 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 MTERF2Q49AM1 385 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 RINT1Q6NUQ1 792 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 CYP2W1Q8TAV3 490 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 TUBB6Q9BUF5 446 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 WDR11Q9BZH6 1224 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 NGRNQ9NPE2 291 aaKnown RBP14.3□□□□□ -0.12
USP42-206ENST00000479544 PIK3R2O00459 728 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 NTSR2O95665 410 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 PSMA2P25787 234 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 ZNF543Q08ER8 600 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 CD302Q8IX05 232 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 SERPINB12Q96P63 405 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 FAM111AQ96PZ2 611 aa14.3□□□□□ -0.12
USP42-206ENST00000479544 DENND3A2RUS2 1198 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 FUT2Q10981 343 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 MED21Q13503 144 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 ITPK1Q13572 414 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 AUHQ13825 339 aaKnown RBP14.29□□□□□ -0.12
USP42-206ENST00000479544 CNGA2Q16280 664 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 DAB2IPQ5VWQ8 1189 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 HAUS6Q7Z4H7 955 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 WDR75Q8IWA0 830 aaKnown RBP14.29□□□□□ -0.12
USP42-206ENST00000479544 RHOT1Q8IXI2 618 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 DHX38Q92620 1227 aaKnown RBP14.29□□□□□ -0.12
USP42-206ENST00000479544 KIFC3Q9BVG8 833 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 APOL6Q9BWW8 343 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 MRPL11Q9Y3B7 192 aaKnown RBP14.29□□□□□ -0.12
USP42-206ENST00000479544 C2CD2Q9Y426 696 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 ABCB11O95342 1321 aa14.29□□□□□ -0.12
USP42-206ENST00000479544 NDC80O14777 642 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms