RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 NSMFQ6X4W1 530 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 RNF217Q8TC41 542 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 KIFC3Q9BVG8 833 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 BATF3Q9NR55 127 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 ZMYND8Q9ULU4 1186 aaPredicted RBP14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 COL4A5P29400 1685 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 ATP9AO75110 1047 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 SOX10P56693 466 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 CDCA2Q69YH5 1023 aaPredicted RBP14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 FAM47EQ6ZV65 393 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 MIER3Q7Z3K6 550 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 CLEC4DQ8WXI8 215 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 ZNF341Q9BYN7 854 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 RAVER2Q9HCJ3 691 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 STK24Q9Y6E0 443 aa14.22□□□□□ -0.13
PDZRN3-208ENST00000479530 PASKQ96RG2 1323 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 SGPL1O95470 568 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 EGFRP00533 1210 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 ATP2A2P16615 1042 aaKnown RBP14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 HSPA6P17066 643 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 FOXN2P32314 431 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 HADHBP55084 474 aaKnown RBP14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 KRT17Q04695 432 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 CALCOCO2Q13137 446 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 MIS18BP1Q6P0N0 1132 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 RNF207Q6ZRF8 634 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 TMEM237Q96Q45 408 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 HERPUD2Q9BSE4 406 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 ROPN1BQ9BZX4 212 aaPredicted RBP14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 ROPN1Q9HAT0 212 aaPredicted RBP14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 ETNK1Q9HBU6 452 aa14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 ZNF646O15015 1829 aaPredicted RBP14.21□□□□□ -0.13
PDZRN3-208ENST00000479530 SPOPO43791 374 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 ECEL1O95672 775 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 EIF2AK2P19525 551 aaKnown RBP14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 VPS41P49754 854 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 NBPF20Q3BBV1 942 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 PLA2G4FQ68DD2 849 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 CAPRIN2Q6IMN6 1127 aaKnown RBP14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 TRMT10CQ7L0Y3 403 aaKnown RBP14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 CYFIP1Q7L576 1253 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 CROCCP2Q86T23 111 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 LARGE2Q8N3Y3 721 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 GBP7Q8N8V2 638 aaPredicted RBP14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 ZNF483Q8TF39 744 aaPredicted RBP14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 SPOCK2Q92563 424 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 RUNDC3BQ96NL0 473 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 MKNK1Q9BUB5 465 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 CHST7Q9NS84 486 aa14.21□□□□□ -0.14
PDZRN3-208ENST00000479530 ENO4A6NNW6 628 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 SLC16A4O15374 487 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 GBP1P32455 592 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 PTGER2P43116 358 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 TMEM63BQ5T3F8 832 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 RHBDF2Q6PJF5 856 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 NOP9Q86U38 636 aaKnown RBP14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 SRRM1Q8IYB3 904 aaKnown RBP14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 FLAD1Q8NFF5 587 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 SERPINB12Q96P63 405 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 TAAR1Q96RJ0 339 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 TAOK3Q9H2K8 898 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 ASIC3Q9UHC3 531 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 STX2P32856 288 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 RARRES1P49788 294 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 CLUL1Q15846 466 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 NFIL3Q16649 462 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 RPS6KC1Q96S38 1066 aa14.2□□□□□ -0.14
PDZRN3-208ENST00000479530 O00370 1275 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 IRF6O14896 467 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 TTC4O95801 387 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 CCNB1P14635 433 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 GM2AP17900 193 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 IVDP26440 423 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 HSD17B4P51659 736 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 TKFCQ3LXA3 575 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 TRIM68Q6AZZ1 485 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 SLC47A2Q86VL8 602 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 WNK4Q96J92 1243 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 FAM118BQ9BPY3 351 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 NUP85Q9BW27 656 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 SEL1LQ9UBV2 794 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 PGAP2Q9UHJ9 254 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 MTUS1Q9ULD2 1270 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 USP20Q9Y2K6 914 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 SORBS3O60504 671 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 UNC5CO95185 931 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 ADRB2P07550 413 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 TAC1P20366 129 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 VAMP7P51809 220 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 ITGA8P53708 1063 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 PEX3P56589 373 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 LACTBP83111 547 aaPredicted RBP14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 OGFOD1Q8N543 542 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 ZNF564Q8TBZ8 553 aaPredicted RBP14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 SEMA4DQ92854 862 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 SAAL1Q96ER3 474 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 IFT74Q96LB3 600 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 WNT8AQ9H1J5 351 aa14.19□□□□□ -0.14
PDZRN3-208ENST00000479530 MYLK2Q9H1R3 596 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms