RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TTC25Q96NG3 672 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 CELF4Q9BZC1 486 aaKnown RBP15.19■□□□□ 0.02
COL20A1-206ENST00000479501 ISCUQ9H1K1 167 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 AIPL1Q9NZN9 384 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 WDR91A4D1P6 747 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 PI4K2BG5E9Z4 385 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 BRAFP15056 766 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 VCAM1P19320 739 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 NPTX2P47972 431 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 NOP14P78316 857 aaKnown RBP15.19■□□□□ 0.02
COL20A1-206ENST00000479501 FBXW10Q5XX13 1052 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 PCGF5Q86SE9 256 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 JAMLQ86YT9 394 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 ZIM3Q96PE6 472 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 PITPNM3Q9BZ71 974 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 SMARCAD1Q9H4L7 1026 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 HAUS2Q9NVX0 235 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 DDX56Q9NY93 547 aaKnown RBP15.19■□□□□ 0.02
COL20A1-206ENST00000479501 EML1O00423 815 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 PLSCR1O15162 318 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 MAP3K7O43318 606 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 KRT3P12035 628 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 SGSM1Q2NKQ1 1148 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 TMCO4Q5TGY1 634 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 PCNX4Q63HM2 1172 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 TRIM42Q8IWZ5 723 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 PARP9Q8IXQ6 854 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 TMEM117Q9H0C3 514 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 CYP26B1Q9NR63 512 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 GTF3C4Q9UKN8 822 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 ITKQ08881 620 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 BYSLQ13895 437 aaKnown RBP15.18■□□□□ 0.02
COL20A1-206ENST00000479501 R3HDM1Q15032 1099 aaKnown RBP15.18■□□□□ 0.02
COL20A1-206ENST00000479501 BZW1Q7L1Q6 419 aaKnown RBP15.18■□□□□ 0.02
COL20A1-206ENST00000479501 C4orf32Q8N8J7 132 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 GLIS3Q8NEA6 775 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 ERP44Q9BS26 406 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 KLC2Q9H0B6 622 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
COL20A1-206ENST00000479501 AFDNP55196 1824 aaKnown RBP15.18■□□□□ 0.02
COL20A1-206ENST00000479501 FGFR4P22455 802 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 PPP2R5CQ13362 524 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 KIF22Q14807 665 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 NXNQ6DKJ4 435 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 C4orf19Q8IY42 314 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL20A1-206ENST00000479501 C18orf8Q96DM3 657 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 SPDL1Q96EA4 605 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 ANKZF1Q9H8Y5 726 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 TOPAZ1Q8N9V7 1692 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 IQANK1A0A1B0GTG1 560 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 F8VZ95 297 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 MAPK13O15264 365 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 KIF1CO43896 1103 aaKnown RBP15.18■□□□□ 0.02
COL20A1-206ENST00000479501 NR1H3Q13133 447 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 MYBPC2Q14324 1141 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 SPARCL1Q14515 664 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 PRPSAP1Q14558 356 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 SLC35C1Q96A29 364 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 CFAP36Q96G28 342 aa15.18■□□□□ 0.02
COL20A1-206ENST00000479501 BCL9LQ86UU0 1499 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 HUS1O60921 280 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 OATP04181 439 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 MUM1L1Q5H9M0 696 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 HP1BP3Q5SSJ5 553 aaPredicted RBP15.17■□□□□ 0.02
COL20A1-206ENST00000479501 NBPF12Q5TAG4 269 aaPredicted RBP15.17■□□□□ 0.02
COL20A1-206ENST00000479501 TWF2Q6IBS0 349 aaKnown RBP15.17■□□□□ 0.02
COL20A1-206ENST00000479501 DSTYKQ6XUX3 929 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 KIF12Q96FN5 646 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 TUBB6Q9BUF5 446 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 CXorf56Q9H5V9 222 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 MLXIPLQ9NP71 852 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 KCNMB3Q9NPA1 279 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 THEGQ9P2T0 379 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 MEIS2O14770 477 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 VIL1P09327 827 aaKnown RBP15.17■□□□□ 0.02
COL20A1-206ENST00000479501 ESRRAP11474 423 aaPredicted RBP15.17■□□□□ 0.02
COL20A1-206ENST00000479501 KCNJ1P48048 391 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 RARRES1P49788 294 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 SLC12A3P55017 1021 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 C2orf69Q8N8R5 385 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 LRIG3Q6UXM1 1119 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 ARMC2Q8NEN0 867 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 OR2W6PQ8NHA6 318 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 SENP7Q9BQF6 1050 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 GCOM2Q9BZD3 368 aaPredicted RBP15.17■□□□□ 0.02
COL20A1-206ENST00000479501 AGO4Q9HCK5 861 aaKnown RBP15.17■□□□□ 0.02
COL20A1-206ENST00000479501 PSD3Q9NYI0 1048 aa15.17■□□□□ 0.02
COL20A1-206ENST00000479501 WNT10BO00744 389 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 TFRCP02786 760 aaKnown RBP15.16■□□□□ 0.02
COL20A1-206ENST00000479501 IER5Q5VY09 327 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 LRRC71Q8N4P6 559 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 SLC5A5Q92911 643 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 DNAJC19Q96DA6 116 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 SCYL1Q96KG9 808 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 FAM167BQ9BTA0 163 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 MMTAG2Q9BU76 263 aaKnown RBP15.16■□□□□ 0.02
COL20A1-206ENST00000479501 KIAA1683Q9H0B3 1180 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 SIK3Q9Y2K2 1263 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms