RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 ARGLU1Q9NWB6 273 aaPredicted RBP4.44□□□□□ -1.7
USP25-208ENST00000478932 DMGDHQ9UI17 866 aaKnown RBP4.44□□□□□ -1.7
USP25-208ENST00000478932 NOCTQ9UK39 431 aaKnown RBP4.44□□□□□ -1.7
USP25-208ENST00000478932 NENFQ9UMX5 172 aa4.44□□□□□ -1.7
USP25-208ENST00000478932 AKT3Q9Y243 479 aa4.44□□□□□ -1.7
USP25-208ENST00000478932 NUB1Q9Y5A7 615 aa4.44□□□□□ -1.7
USP25-208ENST00000478932 SCN4AP35499 1836 aa4.44□□□□□ -1.7
USP25-208ENST00000478932 UNC80Q8N2C7 3258 aa4.44□□□□□ -1.7
USP25-208ENST00000478932 LOC285556D6RIA3 1793 aa4.44□□□□□ -1.7
USP25-208ENST00000478932 UMODL1Q5DID0 1318 aa4.44□□□□□ -1.7
USP25-208ENST00000478932 CNTNAP2Q9UHC6 1331 aa4.44□□□□□ -1.7
USP25-208ENST00000478932 CCDC151A5D8V7 595 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ANKRD62A6NC57 917 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 UNCXA6NJT0 531 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ACKR2O00590 384 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 PMM2O15305 246 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 SASH3O75995 380 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ZRANB2O95218 330 aaKnown RBP eCLIP4.43□□□□□ -1.7
USP25-208ENST00000478932 C22orf31O95567 290 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 TBC1D8O95759 1140 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 PIGRP01833 764 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 FGFR4P22455 802 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 RFX1P22670 979 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 GTF2H1P32780 548 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 PIK3CAP42336 1068 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 MCCD1P59942 119 aaPredicted RBP4.43□□□□□ -1.7
USP25-208ENST00000478932 NCOA4Q13772 614 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 GRB14Q14449 540 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 LLGL1Q15334 1064 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 RPS6KA1Q15418 735 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 TAF1CQ15572 869 aaPredicted RBP4.43□□□□□ -1.7
USP25-208ENST00000478932 LONRF2Q1L5Z9 754 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 KIZQ2M2Z5 673 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ZNF568Q3ZCX4 644 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 DUSP28Q4G0W2 176 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 WDR44Q5JSH3 913 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 MARCH8Q5T0T0 291 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 LLGL2Q6P1M3 1020 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 TMEM270Q6UE05 265 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ABRAQ8N0Z2 381 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 TCP11Q8WWU5 503 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 CPA5Q8WXQ8 436 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 SCLT1Q96NL6 688 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ZIC5Q96T25 663 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 AP1M1Q9BXS5 423 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 CCDC113Q9H0I3 377 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 FZD8Q9H461 694 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 TMEM134Q9H6X4 195 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 APOBEC3GQ9HC16 384 aaKnown RBP4.43□□□□□ -1.7
USP25-208ENST00000478932 ABCB6Q9NP58 842 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 VTA1Q9NP79 307 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ST7Q9NRC1 585 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 C1orf112Q9NSG2 853 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 FLRT1Q9NZU1 646 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 A0A0G2JMZ2 1700 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ZSCAN5CA6NGD5 496 aaPredicted RBP4.43□□□□□ -1.7
USP25-208ENST00000478932 GPR25O00155 361 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ABLIM1O14639 778 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 OGTO15294 1046 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 CEP104O60308 925 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 LDHAP00338 332 aaKnown RBP4.43□□□□□ -1.7
USP25-208ENST00000478932 WEE2P0C1S8 567 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 CXCL8P10145 99 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 MYBL2P10244 700 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 CD58P19256 250 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 CYP2B6P20813 491 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 MAPK4P31152 587 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ABCD1P33897 745 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 PAFAH1B1P43034 410 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 PTENP60484 403 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 MYL6P60660 151 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 FMO1Q01740 532 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 GCNT1Q02742 428 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 TNFAIP2Q03169 654 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 TRADDQ15628 312 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 CFAP221Q4G0U5 840 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ATF7IP2Q5U623 682 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 CDCA2Q69YH5 1023 aaPredicted RBP4.43□□□□□ -1.7
USP25-208ENST00000478932 ADAT2Q7Z6V5 191 aaKnown RBP4.43□□□□□ -1.7
USP25-208ENST00000478932 NT5DC3Q86UY8 548 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 CPNE8Q86YQ8 564 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ZBTB8OSQ8IWT0 167 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 GSPT2Q8IYD1 628 aaKnown RBP4.43□□□□□ -1.7
USP25-208ENST00000478932 KIAA0319LQ8IZA0 1049 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 MSANTD4Q8NCY6 345 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 NLRP7Q8WX94 980 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 RFFLQ8WZ73 363 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 DDX1Q92499 740 aaKnown RBP4.43□□□□□ -1.7
USP25-208ENST00000478932 CPB2Q96IY4 423 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 BTBD6Q96KE9 485 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 FUT8Q9BYC5 575 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 TRIM7Q9C029 511 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 FAM49AQ9H0Q0 323 aaPredicted RBP4.43□□□□□ -1.7
USP25-208ENST00000478932 ISCUQ9H1K1 167 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 PTPRHQ9HD43 1115 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ZCCHC17Q9NP64 241 aaKnown RBP4.43□□□□□ -1.7
USP25-208ENST00000478932 RNF19AQ9NV58 838 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 CTTNBP2NLQ9P2B4 639 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 RAB21Q9UL25 225 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 PCDHB8Q9UN66 801 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms