RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 RPL13P26373 211 aaKnown RBP12.35□□□□□ -0.43
SRRT-211ENST00000478693 DSC1Q08554 894 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 BMS1Q14692 1282 aaKnown RBP12.35□□□□□ -0.43
SRRT-211ENST00000478693 SNRNP35Q16560 246 aaKnown RBP12.35□□□□□ -0.43
SRRT-211ENST00000478693 COBLL1Q53SF7 1204 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 CCDC183Q5T5S1 534 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 CRELD2Q6UXH1 353 aaPredicted RBP12.35□□□□□ -0.43
SRRT-211ENST00000478693 CBWD2Q8IUF1 395 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 C12orf56Q8IXR9 622 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 ADSSL1Q8N142 457 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 POF1BQ8WVV4 589 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 RABGGTAQ92696 567 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 C18orf25Q96B23 403 aaPredicted RBP12.35□□□□□ -0.43
SRRT-211ENST00000478693 UROC1Q96N76 676 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 ZMAT2Q96NC0 199 aaKnown RBP12.35□□□□□ -0.43
SRRT-211ENST00000478693 FNBP1Q96RU3 617 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 CDX2Q99626 313 aaPredicted RBP12.35□□□□□ -0.43
SRRT-211ENST00000478693 ASB7Q9H672 318 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 TUBGCP4Q9UGJ1 667 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 TRAF3IP3Q9Y228 551 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.35□□□□□ -0.43
SRRT-211ENST00000478693 RALGAPA2Q2PPJ7 1873 aa12.35□□□□□ -0.43
SRRT-211ENST00000478693 BICDL2A1A5D9 508 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 PODXLO00592 558 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 GRM6O15303 877 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 LPXNO60711 386 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 TADA2AO75478 443 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 DLATP10515 647 aaKnown RBP12.34□□□□□ -0.43
SRRT-211ENST00000478693 CLCNKBP51801 687 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 TFAMQ00059 246 aaKnown RBP12.34□□□□□ -0.43
SRRT-211ENST00000478693 POU5F1Q01860 360 aaKnown RBP12.34□□□□□ -0.43
SRRT-211ENST00000478693 PAK1Q13153 545 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 SURF1Q15526 300 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 XKR4Q5GH76 650 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 CAVIN1Q6NZI2 390 aaKnown RBP12.34□□□□□ -0.43
SRRT-211ENST00000478693 ALKAL1Q6UXT8 129 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 TMEM173Q86WV6 379 aaPredicted RBP12.34□□□□□ -0.43
SRRT-211ENST00000478693 MICAL1Q8TDZ2 1067 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 NELFBQ8WX92 580 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 CCDC127Q96BQ5 260 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
SRRT-211ENST00000478693 DHTKD1Q96HY7 919 aaPredicted RBP12.34□□□□□ -0.43
SRRT-211ENST00000478693 IGSF21Q96ID5 467 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 ANKRD36BP1Q96IX9 119 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 GUCD1Q96NT3 240 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 LMAN2LQ9H0V9 348 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 MTMR10Q9NXD2 777 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 DACH1Q9UI36 760 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 DERAQ9Y315 318 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 R3HCC1Q9Y3T6 440 aaKnown RBP12.34□□□□□ -0.43
SRRT-211ENST00000478693 C2CD2Q9Y426 696 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 NUB1Q9Y5A7 615 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 CEP290O15078 2479 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 KIAA1671Q9BY89 1806 aa12.34□□□□□ -0.43
SRRT-211ENST00000478693 SF3B1O75533 1304 aaKnown RBP eCLIP12.34□□□□□ -0.432e-7■■■□□ 17.2
SRRT-211ENST00000478693 TRIM49BA6NDI0 452 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 CETN3O15182 167 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 MEFVO15553 781 aaPredicted RBP12.33□□□□□ -0.44
SRRT-211ENST00000478693 B3GAT3O94766 335 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 KIF4AO95239 1232 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 TNNC2P02585 160 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 ADRB2P07550 413 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 EPB41P11171 864 aaKnown RBP12.33□□□□□ -0.44
SRRT-211ENST00000478693 CCNE1P24864 410 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 GUCY2FP51841 1108 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 STX17P56962 302 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 PLCB3Q01970 1234 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 UBE3AQ05086 875 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 LRRC63Q05C16 580 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 SOX4Q06945 474 aaPredicted RBP12.33□□□□□ -0.44
SRRT-211ENST00000478693 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 ADAM9Q13443 819 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 MYBPC2Q14324 1141 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 EDRF1Q3B7T1 1238 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 TIGD5Q53EQ6 642 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 PLPP4Q5VZY2 271 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 LMBRD2Q68DH5 695 aaPredicted RBP12.33□□□□□ -0.44
SRRT-211ENST00000478693 SASS6Q6UVJ0 657 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 SLC9A9Q8IVB4 645 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 CACTINQ8WUQ7 758 aaKnown RBP12.33□□□□□ -0.44
SRRT-211ENST00000478693 BCL7CQ8WUZ0 217 aaPredicted RBP12.33□□□□□ -0.44
SRRT-211ENST00000478693 TSPAN18Q96SJ8 248 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 TCF25Q9BQ70 676 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 PAAF1Q9BRP4 392 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 PDE11AQ9HCR9 933 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 TLR9Q9NR96 1032 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 MARCH5Q9NX47 278 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 STK39Q9UEW8 545 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 ADAM28Q9UKQ2 775 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 LZTS1Q9Y250 596 aa12.33□□□□□ -0.44
SRRT-211ENST00000478693 NLRC5Q86WI3 1866 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 F8W810 466 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 URODP06132 367 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 KRT19P08727 400 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 KRT13P13646 458 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 CD44P16070 742 aaKnown RBP12.32□□□□□ -0.44
SRRT-211ENST00000478693 TNNI1P19237 187 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 CYP3A5P20815 502 aa12.32□□□□□ -0.44
SRRT-211ENST00000478693 RPL9P32969 192 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms