RNA–Protein interactions for RNA: ENST00000478443.1

USP22-205, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 1 (best)

Gene USP22, Length 1,071 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-205ENST00000478443 CPSF3Q9UKF6 684 aaKnown RBP16.09■□□□□ 0.17
USP22-205ENST00000478443 UBQLN1Q9UMX0 589 aaKnown RBP16.09■□□□□ 0.17
USP22-205ENST00000478443 DERAQ9Y315 318 aa16.09■□□□□ 0.17
USP22-205ENST00000478443 R3HCC1Q9Y3T6 440 aaKnown RBP16.09■□□□□ 0.17
USP22-205ENST00000478443 KIAA1671Q9BY89 1806 aa16.09■□□□□ 0.17
USP22-205ENST00000478443 COL6A3P12111 3177 aa16.09■□□□□ 0.17
USP22-205ENST00000478443 TTC26A0AVF1 554 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 ZNF233A6NK53 670 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 KLRC4O43908 158 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 SOD2P04179 222 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 CTSAP10619 480 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 CYP3A5P20815 502 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 PAX3P23760 479 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 TMEM132DQ14C87 1099 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 ENOX2Q16206 610 aaKnown RBP16.08■□□□□ 0.16
USP22-205ENST00000478443 USP41Q3LFD5 358 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 TCEAL5Q5H9L2 206 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 PDXDC1Q6P996 788 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 ELMSAN1Q6PJG2 1045 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 NELFCDQ8IXH7 590 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 GPD1LQ8N335 351 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 CACTINQ8WUQ7 758 aaKnown RBP16.08■□□□□ 0.16
USP22-205ENST00000478443 HLA-CQ95604 372 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 C2CD2Q9Y426 696 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 NUB1Q9Y5A7 615 aa16.08■□□□□ 0.16
USP22-205ENST00000478443 COL4A4P53420 1690 aaPredicted RBP16.08■□□□□ 0.16
USP22-205ENST00000478443 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.07■□□□□ 0.16
USP22-205ENST00000478443 ARHGEF37A1IGU5 675 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 LACTBL1A8MY62 500 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 TMEM189-UBE2V1I3L0A0 370 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 CALUO43852 315 aaPredicted RBP16.07■□□□□ 0.16
USP22-205ENST00000478443 DNAJB1P25685 340 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 ADSSP30520 456 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 TNFSF9P41273 254 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 ERVFC1P60507 584 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 STK4Q13043 487 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 STIM1Q13586 685 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 FUT10Q6P4F1 479 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 CLEC17AQ6ZS10 378 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 EP400NLQ6ZTU2 488 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 PPFIBP1Q86W92 1011 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 GPR65Q8IYL9 337 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 MRPL43Q8N983 215 aaKnown RBP16.07■□□□□ 0.16
USP22-205ENST00000478443 FGFBP2Q9BYJ0 223 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 HAPLN2Q9GZV7 340 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.07■□□□□ 0.16
USP22-205ENST00000478443 RBAKQ9NYW8 714 aaPredicted RBP16.07■□□□□ 0.16
USP22-205ENST00000478443 THEGQ9P2T0 379 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 DPP7Q9UHL4 492 aa16.07■□□□□ 0.16
USP22-205ENST00000478443 TRIP11Q15643 1979 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 PODXLO00592 558 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 FSCN2O14926 492 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 FAM189A1O60320 539 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 PRR29P0C7W0 189 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 RPL13P26373 211 aaKnown RBP16.06■□□□□ 0.16
USP22-205ENST00000478443 PPP1R2P41236 205 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 GLUD2P49448 558 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 PNOCQ13519 176 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 CAMK1Q14012 370 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 UPP1Q16831 310 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 USP37Q86T82 979 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 TMEM173Q86WV6 379 aaPredicted RBP16.06■□□□□ 0.16
USP22-205ENST00000478443 XXYLT1Q8NBI6 393 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 SAAL1Q96ER3 474 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 ZMAT2Q96NC0 199 aaKnown RBP16.06■□□□□ 0.16
USP22-205ENST00000478443 CBWD1Q9BRT8 395 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 HERC2P3Q9BVR0 1158 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 ZBP1Q9H171 429 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 PCIF1Q9H4Z3 704 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 IGFLR1Q9H665 355 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 AGPAT3Q9NRZ7 376 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 MARCH5Q9NX47 278 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 HSPBP1Q9NZL4 362 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 IRAK3Q9Y616 596 aa16.06■□□□□ 0.16
USP22-205ENST00000478443 TISP43B9A030 160 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 PDXKO00764 312 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 B4GALT3O60512 393 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 EXOC3O60645 756 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 GADD45BO75293 160 aaPredicted RBP16.05■□□□□ 0.16
USP22-205ENST00000478443 ADRB2P07550 413 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 IRS1P35568 1242 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 NRIP1P48552 1158 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 CLCNKBP51801 687 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 MYBPC2Q14324 1141 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 RBM23Q86U06 439 aaKnown RBP16.05■□□□□ 0.16
USP22-205ENST00000478443 BRSK2Q8IWQ3 736 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 C12orf56Q8IXR9 622 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 GUF1Q8N442 669 aaKnown RBP16.05■□□□□ 0.16
USP22-205ENST00000478443 KIAA0895Q8NCT3 520 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 GLIS3Q8NEA6 775 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 ATXN2LQ8WWM7 1075 aaKnown RBP16.05■□□□□ 0.16
USP22-205ENST00000478443 PABPC5Q96DU9 382 aaKnown RBP16.05■□□□□ 0.16
USP22-205ENST00000478443 FNBP1Q96RU3 617 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 TTPALQ9BTX7 342 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 CLDND1Q9NY35 253 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 FAM50BQ9Y247 325 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 FRMD4BQ9Y2L6 1034 aa16.05■□□□□ 0.16
USP22-205ENST00000478443 C2orf71A6NGG8 1288 aa16.04■□□□□ 0.16
USP22-205ENST00000478443 KIF4AO95239 1232 aa16.04■□□□□ 0.16
USP22-205ENST00000478443 ADH1AP07327 375 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms