RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 NBR1Q14596 966 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 UPP1Q16831 310 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 PABPC1LQ4VXU2 614 aaKnown RBP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 CD300LGQ6UXG3 332 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 RSPO2Q6UXX9 243 aaPredicted RBP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 CEP120Q8N960 986 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 C3orf58Q8NDZ4 430 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 FBXO18Q8NFZ0 1043 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 ING5Q8WYH8 240 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 UROC1Q96N76 676 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 KXD1Q9BQD3 176 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 LLPHQ9BRT6 129 aaKnown RBP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 SEMA4AQ9H3S1 761 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 PPP4R2Q9NY27 417 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 DNMT3BQ9UBC3 853 aaKnown RBP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 DAXXQ9UER7 740 aaPredicted RBP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 NOL7Q9UMY1 257 aaKnown RBP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 TNFSF13BQ9Y275 285 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 COL4A3Q01955 1670 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 GVINP1Q7Z2Y8 2422 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 CACNA1IQ9P0X4 2223 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 PHLPP2Q6ZVD8 1323 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 CITO14578 2027 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 FANCMQ8IYD8 2048 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 SMIM28A0A1B0GU29 152 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 KANSL1LA0AUZ9 987 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 SEC24BO95487 1268 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 POU2F2P09086 479 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 SP9P0CG40 484 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 GLULP15104 373 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 GRM5P41594 1212 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 TRAPPC10P48553 1259 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 PEX3P56589 373 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 OSTNP61366 133 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
CPSF7-211ENST00000477890 MLF2Q15773 248 aaPredicted RBP12.9□□□□□ -0.34
CPSF7-211ENST00000477890 ZNF568Q3ZCX4 644 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 SLC44A4Q53GD3 710 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 ZC3H14Q6PJT7 736 aaKnown RBP12.9□□□□□ -0.34
CPSF7-211ENST00000477890 ANKS3Q6ZW76 656 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 C4orf32Q8N8J7 132 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 FAM184AQ8NB25 1140 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 SNX29Q8TEQ0 813 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 ACO2Q99798 780 aaKnown RBP12.9□□□□□ -0.34
CPSF7-211ENST00000477890 CCDC94Q9BW85 323 aaPredicted RBP12.9□□□□□ -0.34
CPSF7-211ENST00000477890 CDT1Q9H211 546 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 TOPORSQ9NS56 1045 aaPredicted RBP12.9□□□□□ -0.34
CPSF7-211ENST00000477890 KCNH3Q9ULD8 1083 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 MRPS23Q9Y3D9 190 aaKnown RBP12.9□□□□□ -0.34
CPSF7-211ENST00000477890 BACE2Q9Y5Z0 518 aa12.9□□□□□ -0.34
CPSF7-211ENST00000477890 E9PMD0 336 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 NPTX2P47972 431 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 PFKPQ01813 784 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 PRKCQQ04759 706 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 SOX4Q06945 474 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-211ENST00000477890 PTGDRQ13258 359 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 DMP1Q13316 513 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-211ENST00000477890 PDIA5Q14554 519 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 UBXN2BQ14CS0 331 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 ALKAL1Q6UXT8 129 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 RTL10Q7L3V2 364 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 TARS2Q9BW92 718 aaKnown RBP12.89□□□□□ -0.35
CPSF7-211ENST00000477890 MRPL4Q9BYD3 311 aaKnown RBP12.89□□□□□ -0.35
CPSF7-211ENST00000477890 RAB34Q9BZG1 259 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 SLC38A7Q9NVC3 462 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 STK24Q9Y6E0 443 aa12.89□□□□□ -0.35
CPSF7-211ENST00000477890 EP300Q09472 2414 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-211ENST00000477890 PODXLO00592 558 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 PRRG1O14668 218 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 HIP1RO75146 1068 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 LRG1P02750 347 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 RHOP08100 348 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 ELF1P32519 619 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 ARPP19P56211 112 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 ROR1Q01973 937 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 SLC5A9Q2M3M2 681 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 XKR4Q5GH76 650 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 VARS2Q5ST30 1063 aaKnown RBP12.88□□□□□ -0.35
CPSF7-211ENST00000477890 TAS1R3Q7RTX0 852 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 IGSF22Q8N9C0 903 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 ZNF461Q8TAF7 563 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-211ENST00000477890 ZMAT2Q96NC0 199 aaKnown RBP12.88□□□□□ -0.35
CPSF7-211ENST00000477890 HINFPQ9BQA5 517 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 TCHPQ9BT92 498 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 DDX23Q9BUQ8 820 aaKnown RBP12.88□□□□□ -0.35
CPSF7-211ENST00000477890 BCO2Q9BYV7 579 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 TMEM134Q9H6X4 195 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 PTPRHQ9HD43 1115 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 KMT5AQ9NQR1 393 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 SPATA6Q9NWH7 488 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-211ENST00000477890 DNM3Q9UQ16 869 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 MTF2Q9Y483 593 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-211ENST00000477890 PCDHB6Q9Y5E3 794 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 MYH11P35749 1972 aa12.88□□□□□ -0.35
CPSF7-211ENST00000477890 PATJQ8NI35 1801 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms