RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 TXNDC11Q6PKC3 985 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 TEX2Q8IWB9 1127 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 MB21D2Q8IYB1 491 aaPredicted RBP10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 RASEFQ8IZ41 740 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 GSTCDQ8NEC7 633 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 CRYGNQ8WXF5 182 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 SMARCD2Q92925 531 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 ZSWIM3Q96MP5 696 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 JAKMIP1Q96N16 626 aaKnown RBP10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 CORO1BQ9BR76 489 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 DUSP15Q9H1R2 295 aaPredicted RBP10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 AVENQ9NQS1 362 aaPredicted RBP10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 GIT1Q9Y2X7 761 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 CCDC163A0A0D9SF12 145 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 WDR27A2RRH5 827 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 DDX11L8A8MPP1 907 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 ARNTLO00327 626 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 AKAP3O75969 853 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 ERLIN2O94905 339 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 KIF4AO95239 1232 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 LRG1P02750 347 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 PSMA5P28066 241 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 SFNP31947 248 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 JAK3P52333 1124 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 GRIK3Q13003 919 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 BECN1Q14457 450 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 PON2Q15165 354 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 PDXDC1Q6P996 788 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 PDZD4Q76G19 769 aaPredicted RBP10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 RTL10Q7L3V2 364 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 MFSD6LQ8IWD5 586 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 HSCBQ8IWL3 235 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 TTC8Q8TAM2 541 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 FAM200AQ8TCP9 573 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 CPB2Q96IY4 423 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 JPH2Q9BR39 696 aaPredicted RBP10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 TRIM6Q9C030 488 aaPredicted RBP10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 GLT8D2Q9H1C3 349 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 UNC45AQ9H3U1 944 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 NXF3Q9H4D5 531 aaKnown RBP10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 C8orf33Q9H7E9 229 aaPredicted RBP10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 KLK14Q9P0G3 267 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 NCANO14594 1321 aa10.79□□□□□ -0.68
SMARCB1-206ENST00000477836 EML5Q05BV3 1969 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 CASTOR2A6NHX0 329 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 HEPACAM2A8MVW5 462 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 SPECC1L-ADORA2AF8WAN1 911 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 SH2B2O14492 632 aaPredicted RBP10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 CDX4O14627 284 aaPredicted RBP10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 ZNF197O14709 1029 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 KHNYNO15037 678 aaKnown RBP10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 PRC1O43663 620 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 GAS7O60861 476 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 RHOBTB1O94844 696 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 STBD1O95210 358 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 CAPNS1P04632 268 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 CCR2P41597 374 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 CCINQ13939 588 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 ELF2Q15723 593 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 TSGA10IPQ3SY00 556 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 PLA2G4FQ68DD2 849 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 PKN3Q6P5Z2 889 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 NOTUMQ6P988 496 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 YAF2Q8IY57 180 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 HACE1Q8IYU2 909 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 TMTC2Q8N394 836 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 SYNPOQ8N3V7 929 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 FANCBQ8NB91 859 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 GLIS3Q8NEA6 775 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 HNRNPLLQ8WVV9 542 aaKnown RBP10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 PRPF31Q8WWY3 499 aaKnown RBP10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 TM6SF1Q9BZW5 370 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 CSRNP2Q9H175 543 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 PARP2Q9UGN5 583 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 SLC8A2Q9UPR5 921 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 SLC12A7Q9Y666 1083 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 CDY1Q9Y6F8 540 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 CNTNAP5Q8WYK1 1306 aa10.78□□□□□ -0.68
SMARCB1-206ENST00000477836 SPAARA0A1B0GVQ0 90 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 BCLAF3A2AJT9 711 aaKnown RBP10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 MYBPHLA2RUH7 354 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 DCLK1O15075 740 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 MSH4O15457 936 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 TSPAN1O60635 241 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 MICAL2O94851 1124 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 HMGB1P09429 215 aaKnown RBP10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 AXLP30530 894 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 CTHP32929 405 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 SPIRE1Q08AE8 756 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 C19orf57Q0VDD7 668 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 LAMTOR4Q0VGL1 99 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 TUSC3Q13454 348 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 ADCK5Q3MIX3 580 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 CYP4A22Q5TCH4 519 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 LRCH2Q5VUJ6 765 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 BLOC1S2Q6QNY1 142 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 MIER3Q7Z3K6 550 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 MICU3Q86XE3 530 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 RNF149Q8NC42 400 aa10.77□□□□□ -0.69
SMARCB1-206ENST00000477836 ZSCAN18Q8TBC5 510 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms