RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 KCNH6Q9H252 994 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 KMT5AQ9NQR1 393 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 TDP1Q9NUW8 608 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 TMEM140Q9NV12 185 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 PARPBPQ9NWS1 579 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 CEP72Q9P209 647 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 SIK3Q9Y2K2 1263 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 PCDHA13Q9Y5I0 950 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 SGTAO43765 313 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 PEX11BO96011 259 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 SNRPA1P09661 255 aaKnown RBP5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 HK1P19367 917 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 MGAT1P26572 445 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 IL10RAQ13651 578 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 TOB2Q14106 344 aaPredicted RBP5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 PUM1Q14671 1186 aaKnown RBP eCLIP5.88□□□□□ -1.475e-7■□□□□ 8.4
SMNDC1-205ENST00000477763 CCSAPQ6IQ19 270 aaPredicted RBP5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 SLC4A10Q6U841 1118 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 RSPH3Q86UC2 560 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 XYLT1Q86Y38 959 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 CCAR1Q8IX12 1150 aaKnown RBP5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 DRC7Q8IY82 874 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 ZFP28Q8NHY6 868 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 CACTINQ8WUQ7 758 aaKnown RBP5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 RUNDC1Q96C34 613 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 ZNF503Q96F45 646 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 FAM30AQ9NZY2 134 aa5.88□□□□□ -1.47
SMNDC1-205ENST00000477763 GRXCR1A8MXD5 290 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 CXorf49A8MYA2 514 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 H3BML4 177 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 TRIM24O15164 1050 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 SLC16A6O15403 523 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 CLRN1P58418 232 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 GBX1Q14549 363 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 ANKS6Q68DC2 871 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 OTUD7BQ6GQQ9 843 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 EFCAB12Q6NXP0 572 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 DENND1CQ8IV53 801 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 FAM193BQ96PV7 902 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 ACO2Q99798 780 aaKnown RBP5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 TMPRSS5Q9H3S3 457 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 FAM204AQ9H8W3 233 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 GABBR1Q9UBS5 961 aa5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 AJAP1Q9UKB5 411 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-205ENST00000477763 FRMPD2Q68DX3 1309 aaPredicted RBP5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 GPR32O75388 356 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 CDC42EP1Q00587 391 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 MTM1Q13496 603 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 CSRP2Q16527 193 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 CCDC157Q569K6 752 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 RABL3Q5HYI8 236 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 AFMIDQ63HM1 303 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 CCHCR1Q8TD31 782 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 TFAP2CQ92754 450 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 KAT5Q92993 513 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 TTC17Q96AE7 1141 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 CLPTM1LQ96KA5 538 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 NDC1Q9BTX1 674 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 ZNF747Q9BV97 191 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 MAN1C1Q9NR34 630 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 POLHQ9Y253 713 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 PCDHB1Q9Y5F3 818 aa5.86□□□□□ -1.47
SMNDC1-205ENST00000477763 MYBBP1AQ9BQG0 1328 aaKnown RBP5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 DIRC3C9JPN6 131 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 RECQL4O94761 1208 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 ARIH2O95376 493 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 AMY1AP04745 511 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 MYL1P05976 194 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 IL12RB1P42701 662 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 ATP8B2P98198 1209 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 DSC2Q02487 901 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 GRM3Q14832 879 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 RAB39AQ14964 217 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 PPP4R4Q6NUP7 873 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 CRIP3Q6Q6R5 217 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 SEM1Q6ZVN7 128 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 SRGAP1Q7Z6B7 1085 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 CCDC146Q8IYE0 955 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 ZBTB34Q8NCN2 500 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 C3orf20Q8ND61 904 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 OR10H5Q8NGA6 315 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 SLC35B2Q8TB61 432 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 NSUN6Q8TEA1 469 aaKnown RBP5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 PGBD4Q96DM1 585 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 CDK5RAP3Q96JB5 506 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 PLEKHG4BQ96PX9 1271 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 DCLRE1CQ96SD1 692 aaKnown RBP5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 MRI1Q9BV20 369 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 VPS11Q9H270 941 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 SPON1Q9HCB6 807 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 CALCOCO1Q9P1Z2 691 aa5.85□□□□□ -1.47
SMNDC1-205ENST00000477763 WNT10BO00744 389 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 PLIN1O60240 522 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 FTLP02792 175 aaPredicted RBP5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 AMHP03971 560 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 C1SP09871 688 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 ATP5JP18859 108 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 DDCP20711 480 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 PCSK1P29120 753 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms