RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 BIRC3Q13489 604 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 TDRD12Q587J7 1177 aaKnown RBP15.59■□□□□ 0.09
COL4A6-206ENST00000477085 TRAPPC11Q7Z392 1133 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 PPM1KQ8N3J5 372 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 DHX38Q92620 1227 aaKnown RBP15.59■□□□□ 0.09
COL4A6-206ENST00000477085 ARID3AQ99856 593 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 TRMT13Q9NUP7 481 aaKnown RBP15.59■□□□□ 0.09
COL4A6-206ENST00000477085 PTPN22Q9Y2R2 807 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 DAAM1Q9Y4D1 1078 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 CDY2AQ9Y6F7 541 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 AKR1B10O60218 316 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 HSPA6P17066 643 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 PIK3CAP42336 1068 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 PCBP1Q15365 356 aaKnown RBP eCLIP15.59■□□□□ 0.09
COL4A6-206ENST00000477085 PTGISQ16647 500 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 DUOXA2Q1HG44 320 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 UBXN11Q5T124 520 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 SLC27A1Q6PCB7 646 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 RPAINQ86UA6 219 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 FAM228AQ86W67 206 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 NT5C1BQ96P26 610 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 UNC93B1Q9H1C4 597 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 ACP6Q9NPH0 428 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 ADAMTS1Q9UHI8 967 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 HES2Q9Y543 173 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 PCDHA13Q9Y5I0 950 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 DUSP10Q9Y6W6 482 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 UMODL1Q5DID0 1318 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 ZC3H11AO75152 810 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL4A6-206ENST00000477085 CTSHP09668 335 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 FERP16591 822 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 GRM5P41594 1212 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 TFAMQ00059 246 aaKnown RBP15.58■□□□□ 0.08
COL4A6-206ENST00000477085 NCOA4Q13772 614 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 SURF1Q15526 300 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 DNTTIP2Q5QJE6 756 aaKnown RBP15.58■□□□□ 0.08
COL4A6-206ENST00000477085 JADE1Q6IE81 842 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 NOTUMQ6P988 496 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 FAM71AQ8IYT1 594 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 CXorf38Q8TB03 319 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 SHC3Q92529 594 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 VTI1AQ96AJ9 217 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 TSEN34Q9BSV6 310 aaKnown RBP15.58■□□□□ 0.08
COL4A6-206ENST00000477085 SENP6Q9GZR1 1112 aaPredicted RBP15.58■□□□□ 0.08
COL4A6-206ENST00000477085 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL4A6-206ENST00000477085 DEF6Q9H4E7 631 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 SNTG2Q9NY99 539 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 NENFQ9UMX5 172 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 NUB1Q9Y5A7 615 aa15.58■□□□□ 0.08
COL4A6-206ENST00000477085 MOXD2PA6NHM9 499 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 DDX3XO00571 662 aaKnown RBP eCLIP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 CABYRO75952 493 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 IL18RAPO95256 599 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 MYCP01106 439 aaPredicted RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 AP3M2P53677 418 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 MYL6P60660 151 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 KRT83P78385 493 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 POU5F1Q01860 360 aaKnown RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 SLC18A3Q16572 532 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 TRIM71Q2Q1W2 868 aaKnown RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 DNAAF5Q86Y56 855 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 SLC30A5Q8TAD4 765 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 ACAP3Q96P50 834 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 ADPGKQ9BRR6 497 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 SIX4Q9UIU6 781 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 PIN4Q9Y237 131 aaKnown RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 TRPV2Q9Y5S1 764 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 BZW2Q9Y6E2 419 aaKnown RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 MROH7Q68CQ1 1323 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 ANK1P16157 1881 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 A0A1W2PQ45 241 aaPredicted RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 A0A1W2PQY0 241 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 GOLGA6L9A6NEM1 432 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 PHACTR2O75167 634 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 SGPL1O95470 568 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 ACO1P21399 889 aaKnown RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 AXLP30530 894 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 MFAP3P55082 362 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 ETF1P62495 437 aaKnown RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 GCNT1Q02742 428 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 MTFR1Q15390 333 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 DCAF4L1Q3SXM0 396 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 SYT10Q6XYQ8 523 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 ZNF662Q6ZS27 426 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 ZNF710Q8N1W2 664 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 SLC43A3Q8NBI5 491 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 LNX1Q8TBB1 728 aaPredicted RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 ZMAT2Q96NC0 199 aaKnown RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 WDR24Q96S15 920 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 BEGAINQ9BUH8 593 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 XYLT2Q9H1B5 865 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 RNF39Q9H2S5 420 aa15.57■□□□□ 0.08
COL4A6-206ENST00000477085 NXF3Q9H4D5 531 aaKnown RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 AGO3Q9H9G7 860 aaKnown RBP15.57■□□□□ 0.08
COL4A6-206ENST00000477085 CYP26A1O43174 497 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 ASS1P00966 412 aaKnown RBP15.56■□□□□ 0.08
COL4A6-206ENST00000477085 CALCAP01258 141 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 THPOP40225 353 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 VAV2P52735 878 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms