RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 PARP2Q9UGN5 583 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 ARID2Q68CP9 1835 aa17.08■□□□□ 0.33
SMG5-204ENST00000476954 ZNF263O14978 683 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 SGSM2O43147 1006 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 B4GALT5O43286 388 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 NPTXRO95502 500 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 IGHDP01880 384 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 GJA1P17302 382 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 CDC27P30260 824 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 HOXA6P31267 233 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 AMHR2Q16671 573 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 RDM1Q8NG50 284 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 RUFY2Q8WXA3 655 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 JPH2Q9BR39 696 aaPredicted RBP17.08■□□□□ 0.32
SMG5-204ENST00000476954 MTRRQ9UBK8 725 aa17.08■□□□□ 0.32
SMG5-204ENST00000476954 ASCC3Q8N3C0 2202 aaKnown RBP17.08■□□□□ 0.32
SMG5-204ENST00000476954 ESYT2A0FGR8 921 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 HYAL3O43820 417 aaPredicted RBP17.07■□□□□ 0.32
SMG5-204ENST00000476954 ARF4P18085 180 aaPredicted RBP17.07■□□□□ 0.32
SMG5-204ENST00000476954 TUSC3Q13454 348 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 PFKFB3Q16875 520 aaPredicted RBP17.07■□□□□ 0.32
SMG5-204ENST00000476954 SYNE3Q6ZMZ3 975 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 FERMT3Q86UX7 667 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 HS6ST3Q8IZP7 471 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 SLC7A3Q8WY07 619 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 SMARCD2Q92925 531 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 CCDC51Q96ER9 411 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 TCEANC2Q96MN5 208 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 TRIM6Q9C030 488 aaPredicted RBP17.07■□□□□ 0.32
SMG5-204ENST00000476954 DHX33Q9H6R0 707 aaKnown RBP17.07■□□□□ 0.32
SMG5-204ENST00000476954 C6orf50Q9HD87 102 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 WRAP73Q9P2S5 460 aaPredicted RBP17.07■□□□□ 0.32
SMG5-204ENST00000476954 NUP205Q92621 2012 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 NAV2Q8IVL1 2488 aa17.07■□□□□ 0.32
SMG5-204ENST00000476954 INO80B-WBP1J3KQ70 363 aa17.06■□□□□ 0.32
SMG5-204ENST00000476954 MOSPD3O75425 235 aa17.06■□□□□ 0.32
SMG5-204ENST00000476954 CCDC192P0DO97 292 aa17.06■□□□□ 0.32
SMG5-204ENST00000476954 AXLP30530 894 aa17.06■□□□□ 0.32
SMG5-204ENST00000476954 KPNA1P52294 538 aaPredicted RBP17.06■□□□□ 0.32
SMG5-204ENST00000476954 PSMC5P62195 406 aa17.06■□□□□ 0.32
SMG5-204ENST00000476954 GPIHBP1Q8IV16 184 aa17.06■□□□□ 0.32
SMG5-204ENST00000476954 CEP170P1Q96L14 293 aa17.06■□□□□ 0.32
SMG5-204ENST00000476954 POLR3BQ9NW08 1133 aaPredicted RBP17.06■□□□□ 0.32
SMG5-204ENST00000476954 KLK13Q9UKR3 277 aa17.06■□□□□ 0.32
SMG5-204ENST00000476954 PCDHGA5Q9Y5G8 931 aa17.06■□□□□ 0.32
SMG5-204ENST00000476954 SMG1Q96Q15 3661 aaKnown RBP17.05■□□□□ 0.32
SMG5-204ENST00000476954 HEPACAM2A8MVW5 462 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 EML1O00423 815 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 PTGESO14684 152 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 LRG1P02750 347 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 FGFR3P22607 806 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 PTENP60484 403 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 MBTD1Q05BQ5 628 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 PON2Q15165 354 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 DGKKQ5KSL6 1271 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 TTC22Q5TAA0 569 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.05■□□□□ 0.32
SMG5-204ENST00000476954 ZSCAN18Q8TBC5 510 aaPredicted RBP17.05■□□□□ 0.32
SMG5-204ENST00000476954 CSGALNACT1Q8TDX6 532 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 DEPDC1BQ8WUY9 529 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 KIF12Q96FN5 646 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 SNTG2Q9NY99 539 aa17.05■□□□□ 0.32
SMG5-204ENST00000476954 LNP1A1A4G5 178 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 ARHGEF37A1IGU5 675 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 GOLGA8AA7E2F4 631 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 GOLGA8BA8MQT2 603 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 SPECC1L-ADORA2AF8WAN1 911 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 I3L4J1 428 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 SLC27A2O14975 620 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 ZBTB43O43298 467 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 SEC24AO95486 1093 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 TDP2O95551 362 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 TKTP29401 623 aaKnown RBP17.04■□□□□ 0.32
SMG5-204ENST00000476954 EMC2Q15006 297 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 NAB2Q15742 525 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 PLK5Q496M5 336 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 PDXDC1Q6P996 788 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 PDZD3Q86UT5 571 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 MFSD6LQ8IWD5 586 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 HACE1Q8IYU2 909 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 ABCA7Q8IZY2 2146 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 DEFB124Q8NES8 71 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 ZC3H10Q96K80 434 aaKnown RBP17.04■□□□□ 0.32
SMG5-204ENST00000476954 BBC3Q96PG8 261 aaPredicted RBP17.04■□□□□ 0.32
SMG5-204ENST00000476954 TRIP11Q15643 1979 aa17.04■□□□□ 0.32
SMG5-204ENST00000476954 PCNX2A6NKB5 2137 aa17.03■□□□□ 0.32
SMG5-204ENST00000476954 ZBTB39O15060 712 aa17.03■□□□□ 0.32
SMG5-204ENST00000476954 DCLK1O15075 740 aa17.03■□□□□ 0.32
SMG5-204ENST00000476954 CTHP32929 405 aa17.03■□□□□ 0.32
SMG5-204ENST00000476954 ADD1P35611 737 aaKnown RBP17.03■□□□□ 0.32
SMG5-204ENST00000476954 ROR1Q01973 937 aa17.03■□□□□ 0.32
SMG5-204ENST00000476954 CREB5Q02930 508 aa17.03■□□□□ 0.32
SMG5-204ENST00000476954 SPIRE1Q08AE8 756 aa17.03■□□□□ 0.32
SMG5-204ENST00000476954 CCINQ13939 588 aa17.03■□□□□ 0.32
SMG5-204ENST00000476954 DAB2IPQ5VWQ8 1189 aa17.03■□□□□ 0.32
SMG5-204ENST00000476954 PDZD4Q76G19 769 aaPredicted RBP17.03■□□□□ 0.32
SMG5-204ENST00000476954 RTL10Q7L3V2 364 aa17.03■□□□□ 0.32
SMG5-204ENST00000476954 DDX27Q96GQ7 796 aaKnown RBP17.03■□□□□ 0.32
SMG5-204ENST00000476954 ZFYVE19Q96K21 471 aa17.03■□□□□ 0.32
SMG5-204ENST00000476954 DUSP15Q9H1R2 295 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms