RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 MAN2B1O00754 1011 aa18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 RECQL4O94761 1208 aa18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 RETP07949 1114 aa18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 FCARP24071 287 aa18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 GRM2Q14416 872 aa18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 PIK3AP1Q6ZUJ8 805 aa18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 SLFN12Q8IYM2 578 aa18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 PRIMPOLQ96LW4 560 aa18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 NAP1L4Q99733 375 aaKnown RBP18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 FZD8Q9H461 694 aa18.19■□□□□ 0.5
APOBEC3F-203ENST00000476513 LRRIQ4A6NIV6 560 aa18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 LRP3O75074 770 aa18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 RARRES1P49788 294 aa18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 PRR23BQ6ZRT6 265 aa18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 OXER1Q8TDS5 423 aa18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 CHAMP1Q96JM3 812 aa18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 IER2Q9BTL4 223 aa18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 PDZD7Q9H5P4 517 aa18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 BRD9Q9H8M2 597 aa18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 GPRC5CQ9NQ84 441 aa18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 PRMT7Q9NVM4 692 aaPredicted RBP18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 BACE2Q9Y5Z0 518 aa18.18■□□□□ 0.5
APOBEC3F-203ENST00000476513 A0A087WWV3 80 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 TMEM189-UBE2V1I3L0A0 370 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 NRG2O14511 850 aaPredicted RBP18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 USO1O60763 962 aaKnown RBP18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 B3GAT3O94766 335 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 BAG4O95429 457 aaKnown RBP18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 PTPN2P17706 415 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 CCR3P51677 355 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 PPP2R5DQ14738 602 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 FAM187BQ17R55 369 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 EARS2Q5JPH6 523 aaKnown RBP18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 FAM78AQ5JUQ0 283 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 CD300LGQ6UXG3 332 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 NOSTRINQ8IVI9 506 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 PIGOQ8TEQ8 1089 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 ZNF274Q96GC6 653 aaPredicted RBP18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 DDX27Q96GQ7 796 aaKnown RBP18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 CCDC43Q96MW1 224 aaKnown RBP18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 LARP6Q9BRS8 491 aaKnown RBP18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 TRMT61BQ9BVS5 477 aaKnown RBP18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 LMAN1LQ9HAT1 526 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 ZFP14Q9HCL3 533 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 SEMA4GQ9NTN9 838 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 VWA8A3KMH1 1905 aa18.17■□□□□ 0.5
APOBEC3F-203ENST00000476513 ARHGEF37A1IGU5 675 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 N4BP3O15049 544 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 TKTP29401 623 aaKnown RBP18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 STK3Q13188 491 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 PRSS36Q5K4E3 855 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 CDCA2Q69YH5 1023 aaPredicted RBP18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 CPLX2Q6PUV4 134 aaKnown RBP18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 PRR23CQ6ZRP0 262 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 ANKS3Q6ZW76 656 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 RUFY3Q7L099 469 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 MAEAQ7L5Y9 396 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 MAP4K3Q8IVH8 894 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 FAM3CQ92520 227 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 TCEAL4Q96EI5 215 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 GJB4Q9NTQ9 266 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 USP20Q9Y2K6 914 aa18.16■□□□□ 0.5
APOBEC3F-203ENST00000476513 CHD6Q8TD26 2715 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 FAM205CA6NFA0 338 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 I3L4J1 428 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 HRO43593 1189 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 GDF9O60383 454 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 LRG1P02750 347 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 RBM25P49756 843 aaKnown RBP18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 SATB1Q01826 763 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 SIM2Q14190 667 aaPredicted RBP18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 CSRP2Q16527 193 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 ZBTB8OSQ8IWT0 167 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 IRF7Q92985 503 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 CORO1BQ9BR76 489 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 ZNF334Q9HCZ1 680 aaPredicted RBP18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 TRPV5Q9NQA5 729 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 PCDHA12Q9UN75 941 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 GDAQ9Y2T3 454 aa18.15■□□□□ 0.5
APOBEC3F-203ENST00000476513 ABLIM3O94929 683 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 CCR2P41597 374 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 CXCL12P48061 93 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 CLCNKBP51801 687 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 ROR1Q01973 937 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 DMWDQ09019 674 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 PRPF4BQ13523 1007 aaKnown RBP18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 GAS6Q14393 721 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 TMEM132AQ24JP5 1023 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 GLRA4Q5JXX5 417 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 EEF1DP3Q658K8 133 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 SLC8B1Q6J4K2 584 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 VITQ6UXI7 678 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 ZNF461Q8TAF7 563 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 ASB16Q96NS5 453 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 PPP1R10Q96QC0 940 aaKnown RBP18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 ZSWIM6Q9HCJ5 1215 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 PIAS3Q9Y6X2 628 aa18.14■□□□□ 0.49
APOBEC3F-203ENST00000476513 WDR27A2RRH5 827 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 CHURC1-FNTBB4DL54 471 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 PRRG1O14668 218 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms