RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 TOPORSQ9NS56 1045 aaPredicted RBP6.51□□□□□ -1.37
SSR3-206ENST00000476217 USP18Q9UMW8 372 aa6.51□□□□□ -1.37
SSR3-206ENST00000476217 ZFR2Q9UPR6 939 aaKnown RBP6.51□□□□□ -1.37
SSR3-206ENST00000476217 NCANO14594 1321 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 VIRMAQ69YN4 1812 aaKnown RBP6.5□□□□□ -1.37
SSR3-206ENST00000476217 C2orf78A6NCI8 922 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 GOLGA8BA8MQT2 603 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 ALG1L2C9J202 215 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 RRP1P56182 461 aaKnown RBP6.5□□□□□ -1.37
SSR3-206ENST00000476217 BPIFB4P59827 614 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 IRX6P78412 446 aaPredicted RBP6.5□□□□□ -1.37
SSR3-206ENST00000476217 EXOSC9Q06265 439 aaKnown RBP6.5□□□□□ -1.37
SSR3-206ENST00000476217 TEFQ10587 303 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 KRT40Q6A162 431 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 CCDC62Q6P9F0 684 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 ADGRE4PQ86SQ3 457 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 C1QTNF3Q9BXJ4 246 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 DEF6Q9H4E7 631 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 MAGEL2Q9UJ55 1249 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 TMPRSS11EQ9UL52 423 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 RBM8AQ9Y5S9 174 aaKnown RBP6.5□□□□□ -1.37
SSR3-206ENST00000476217 LRP6O75581 1613 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 PCDH11XQ9BZA7 1347 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 PCDH11YQ9BZA8 1340 aa6.5□□□□□ -1.37
SSR3-206ENST00000476217 A0A0A6YYK5 440 aaPredicted RBP6.49□□□□□ -1.37
SSR3-206ENST00000476217 GOLGA8AA7E2F4 631 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 MATN2O00339 956 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 ZNF623O75123 536 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 CT47B1P0C2W7 299 aaPredicted RBP6.49□□□□□ -1.37
SSR3-206ENST00000476217 GAAP10253 952 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 PHKG2P15735 406 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 POU3F3P20264 500 aaPredicted RBP6.49□□□□□ -1.37
SSR3-206ENST00000476217 COMTP21964 271 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 SELENOPP49908 381 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 WNT3AP56704 352 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 PPARAQ07869 468 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSR3-206ENST00000476217 ANO4Q32M45 955 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 TCTN3Q6NUS6 607 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 FAM180AQ6UWF9 173 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 PRRT2Q7Z6L0 340 aaPredicted RBP6.49□□□□□ -1.37
SSR3-206ENST00000476217 DDX42Q86XP3 938 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSR3-206ENST00000476217 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.49□□□□□ -1.37
SSR3-206ENST00000476217 LMBR1Q8WVP7 490 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 SSH1Q8WYL5 1049 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 DVL3Q92997 716 aaPredicted RBP6.49□□□□□ -1.37
SSR3-206ENST00000476217 FAM89AQ96GI7 184 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 PTPN18Q99952 460 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 DPYSL5Q9BPU6 564 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 SOX7Q9BT81 388 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 PLA2G12BQ9BX93 195 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 SLC5A4Q9NY91 659 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 TSPYL4Q9UJ04 414 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 CDY2AQ9Y6F7 541 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 SHANK3Q9BYB0 1731 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 SLIT2O94813 1529 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 SCN11AQ9UI33 1791 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 ADAMTS7Q9UKP4 1686 aa6.49□□□□□ -1.37
SSR3-206ENST00000476217 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.48□□□□□ -1.37
SSR3-206ENST00000476217 CEMIPQ8WUJ3 1361 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 A0A1W2PRX2 142 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 RNMTO43148 476 aaKnown RBP6.48□□□□□ -1.37
SSR3-206ENST00000476217 TOX4O94842 621 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 HSP90AB1P08238 724 aaKnown RBP6.48□□□□□ -1.37
SSR3-206ENST00000476217 ZNF853P0CG23 659 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 NCLP19338 710 aaKnown RBP6.48□□□□□ -1.37
SSR3-206ENST00000476217 ATP2C1P98194 919 aaPredicted RBP6.48□□□□□ -1.37
SSR3-206ENST00000476217 HHEXQ03014 270 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 RIN1Q13671 783 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 PDCD1Q15116 288 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 TWISTNBQ3B726 338 aaPredicted RBP6.48□□□□□ -1.37
SSR3-206ENST00000476217 PITRM1Q5JRX3 1037 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 LCE4AQ5TA78 99 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 SLC41A1Q8IVJ1 513 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 ANKRD53Q8N9V6 530 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 IL17REQ8NFR9 667 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 AUTS2Q8WXX7 1259 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 EDAQ92838 391 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 GNRHR2Q96P88 292 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 MS4A5Q9H3V2 200 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 SMC4Q9NTJ3 1288 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.48□□□□□ -1.37
SSR3-206ENST00000476217 KDM3BQ7LBC6 1761 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 KDM6AO15550 1401 aaPredicted RBP6.48□□□□□ -1.37
SSR3-206ENST00000476217 SPATA31A1Q5TZJ5 1347 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 RNF123Q5XPI4 1314 aa6.48□□□□□ -1.37
SSR3-206ENST00000476217 MRC1P22897 1456 aa6.47□□□□□ -1.37
SSR3-206ENST00000476217 SIPA1L3O60292 1781 aaPredicted RBP6.47□□□□□ -1.37
SSR3-206ENST00000476217 LCHNA4D1U4 455 aa6.47□□□□□ -1.37
SSR3-206ENST00000476217 CHL1O00533 1208 aa6.47□□□□□ -1.37
SSR3-206ENST00000476217 CYP27B1O15528 508 aa6.47□□□□□ -1.37
SSR3-206ENST00000476217 BCAR3O75815 825 aa6.47□□□□□ -1.37
SSR3-206ENST00000476217 PRKD3O94806 890 aa6.47□□□□□ -1.37
SSR3-206ENST00000476217 ADRB1P08588 477 aa6.47□□□□□ -1.37
SSR3-206ENST00000476217 HNRNPLP14866 589 aaKnown RBP eCLIP6.47□□□□□ -1.37
SSR3-206ENST00000476217 SLC5A3P53794 718 aa6.47□□□□□ -1.37
SSR3-206ENST00000476217 RARSP54136 660 aaKnown RBP6.47□□□□□ -1.37
SSR3-206ENST00000476217 LGALS4P56470 323 aa6.47□□□□□ -1.37
SSR3-206ENST00000476217 DUSP8Q13202 625 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms