RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ATP11BQ9Y2G3 1177 aa8.43□□□□□ -1.06
SMC5-203ENST00000475540 USP15Q9Y4E8 981 aaPredicted RBP8.43□□□□□ -1.06
SMC5-203ENST00000475540 GAGE12BA1L429 117 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 GAGE12HA6NDE8 117 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 ZNF185O15231 689 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 SGTAO43765 313 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 AKAP8O43823 692 aaKnown RBP8.42□□□□□ -1.06
SMC5-203ENST00000475540 ZSCAN20P17040 1043 aaPredicted RBP8.42□□□□□ -1.06
SMC5-203ENST00000475540 LAG3P18627 525 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 EDNRBP24530 442 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 CTXN1P60606 82 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 IL10RAQ13651 578 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 TIGD2Q4W5G0 525 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 PLXDC1Q8IUK5 500 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 LENG9Q96B70 501 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 TMX3Q96JJ7 454 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 SCAND2PQ9GZW5 306 aaPredicted RBP8.42□□□□□ -1.06
SMC5-203ENST00000475540 SLC23A1Q9UHI7 598 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 CHST2Q9Y4C5 530 aa8.42□□□□□ -1.06
SMC5-203ENST00000475540 ITGB1P05556 798 aa8.41□□□□□ -1.06
SMC5-203ENST00000475540 ALAS1P13196 640 aa8.41□□□□□ -1.06
SMC5-203ENST00000475540 NR4A1P22736 598 aa8.41□□□□□ -1.06
SMC5-203ENST00000475540 NEK2P51955 445 aa8.41□□□□□ -1.06
SMC5-203ENST00000475540 C3orf36Q3SXR2 165 aa8.41□□□□□ -1.06
SMC5-203ENST00000475540 PDCD4Q53EL6 469 aaKnown RBP8.41□□□□□ -1.06
SMC5-203ENST00000475540 TSHZ3Q63HK5 1081 aa8.41□□□□□ -1.06
SMC5-203ENST00000475540 METRNLQ641Q3 311 aa8.41□□□□□ -1.06
SMC5-203ENST00000475540 UBE3BQ7Z3V4 1068 aa8.41□□□□□ -1.06
SMC5-203ENST00000475540 ZFPM1Q8IX07 1006 aa8.41□□□□□ -1.06
SMC5-203ENST00000475540 AKIP1Q9NQ31 210 aa8.41□□□□□ -1.06
SMC5-203ENST00000475540 AASDHPPTQ9NRN7 309 aa8.41□□□□□ -1.06
SMC5-203ENST00000475540 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.41□□□□□ -1.06
SMC5-203ENST00000475540 LUC7L2Q9Y383 392 aaKnown RBP8.41□□□□□ -1.06
SMC5-203ENST00000475540 NCR1O76036 304 aa8.4□□□□□ -1.06
SMC5-203ENST00000475540 HLA-DOAP06340 250 aa8.4□□□□□ -1.06
SMC5-203ENST00000475540 PDGFRBP09619 1106 aa8.4□□□□□ -1.06
SMC5-203ENST00000475540 TARDBPQ13148 414 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMC5-203ENST00000475540 MRGPREQ86SM8 312 aa8.4□□□□□ -1.06
SMC5-203ENST00000475540 TTC7BQ86TV6 843 aa8.4□□□□□ -1.06
SMC5-203ENST00000475540 RHOT2Q8IXI1 618 aa8.4□□□□□ -1.06
SMC5-203ENST00000475540 NLGN4YQ8NFZ3 816 aaPredicted RBP8.4□□□□□ -1.06
SMC5-203ENST00000475540 NEU4Q8WWR8 484 aaPredicted RBP8.4□□□□□ -1.06
SMC5-203ENST00000475540 RAB24Q969Q5 203 aa8.4□□□□□ -1.06
SMC5-203ENST00000475540 C11orf54Q9H0W9 315 aaPredicted RBP8.4□□□□□ -1.06
SMC5-203ENST00000475540 SERPINB13Q9UIV8 391 aa8.4□□□□□ -1.06
SMC5-203ENST00000475540 TCRBV7S2A1N4TA0A589 114 aa8.39□□□□□ -1.07
SMC5-203ENST00000475540 KIAA0391O15091 583 aaKnown RBP8.39□□□□□ -1.07
SMC5-203ENST00000475540 ZRANB2O95218 330 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMC5-203ENST00000475540 FAM189BP81408 668 aa8.39□□□□□ -1.07
SMC5-203ENST00000475540 RAB39AQ14964 217 aa8.39□□□□□ -1.07
SMC5-203ENST00000475540 LY6G5CQ5SRR4 150 aa8.39□□□□□ -1.07
SMC5-203ENST00000475540 AGAP9Q5VTM2 703 aa8.39□□□□□ -1.07
SMC5-203ENST00000475540 CPA6Q8N4T0 437 aa8.39□□□□□ -1.07
SMC5-203ENST00000475540 MYEOVQ96EZ4 313 aa8.39□□□□□ -1.07
SMC5-203ENST00000475540 CLPTM1LQ96KA5 538 aa8.39□□□□□ -1.07
SMC5-203ENST00000475540 GSTO2Q9H4Y5 243 aa8.39□□□□□ -1.07
SMC5-203ENST00000475540 PCDHB1Q9Y5F3 818 aa8.39□□□□□ -1.07
SMC5-203ENST00000475540 CFAP20Q9Y6A4 193 aaKnown RBP8.39□□□□□ -1.07
SMC5-203ENST00000475540 ALDH1L1O75891 902 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 NDUFA10O95299 355 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 IL33O95760 270 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 ABHD16AO95870 558 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 MXRA7P84157 204 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 FHL2Q14192 279 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 PTPAQ15257 358 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 TMEM240Q5SV17 173 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 DACT2Q5SW24 774 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 GADL1Q6ZQY3 521 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 CMTR2Q8IYT2 770 aaKnown RBP8.38□□□□□ -1.07
SMC5-203ENST00000475540 FITM2Q8N6M3 262 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 IFI44Q8TCB0 444 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 PROKR1Q8TCW9 393 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 STAG1Q8WVM7 1258 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 KAT5Q92993 513 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 TEX101Q9BY14 249 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 FBXO34Q9NWN3 711 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 FPGT-TNNI3KV9GXZ4 949 aa8.38□□□□□ -1.07
SMC5-203ENST00000475540 MTHFD1P11586 935 aaKnown RBP8.37□□□□□ -1.07
SMC5-203ENST00000475540 VCAM1P19320 739 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 KLF10Q13118 480 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 KCNV1Q6PIU1 500 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 LRRC55Q6ZSA7 311 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 RHOUQ7L0Q8 258 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 OR56A1Q8NGH5 318 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 LARP4BQ92615 738 aaKnown RBP8.37□□□□□ -1.07
SMC5-203ENST00000475540 HSPBAP1Q96EW2 488 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 SORCS2Q96PQ0 1159 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 NEU1Q99519 415 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 PCED1AQ9H1Q7 454 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 MAN1C1Q9NR34 630 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 KLHL11Q9NVR0 708 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 CALCOCO1Q9P1Z2 691 aa8.37□□□□□ -1.07
SMC5-203ENST00000475540 CKBP12277 381 aa8.36□□□□□ -1.07
SMC5-203ENST00000475540 PDCP20941 246 aa8.36□□□□□ -1.07
SMC5-203ENST00000475540 SLC6A2P23975 617 aa8.36□□□□□ -1.07
SMC5-203ENST00000475540 BMPR1AP36894 532 aa8.36□□□□□ -1.07
SMC5-203ENST00000475540 BEAN1Q3B7T3 259 aa8.36□□□□□ -1.07
SMC5-203ENST00000475540 HOOK2Q96ED9 719 aa8.36□□□□□ -1.07
SMC5-203ENST00000475540 MRGPRX4Q96LA9 322 aa8.36□□□□□ -1.07
SMC5-203ENST00000475540 IP6K2Q9UHH9 426 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms